Non-Coding RNA Search

Ss1.1-rjej04b_k24.5

Sequence:


               
               ACTCCTACTTTCTGGAGGGGGAGGTTAAGTGGGAAGCCAGATCCTAGATTTCCAGGTCCT
TGAAGAAGGGGAGGGATGGAAGCCAGGATTTCCTTTTGTTGTTGCTGT------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
CTCCTTTTTTTGAGAGAAGCTGCAGGGTCCCAGGGAAACAAGCTGGATTCTGATGAAGAA
AGAAGCATGAGGGCCCAGAATTCTGCCTAAGGAGCAAGGGCAGGCAGGACCTGCCCATCT
TTTACACCAGAAACCAAATCAGTCTTCTGGGATCTGAGGTTTCCTTGCACCCTGCTGCCT
GTACATATATTTTCTTTTATCCCATAATTTATTAAATCACTCTTCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTCCTACTTTCTGGAGGGGGAGGTTAAGTGGGAAGCCAGATCCTAGATTTCCAGGTCCT
TGAAGAAGGGGAGGGATGGAAGCCAGGATTTCCTTTTGTTGTTGCTGT------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
CTCCTTTTTTTGAGAGAAGCTGCAGGGTCCCAGGGAAACAAGCTGGATTCTGATGAAGAA
AGAAGCATGAGGGCCCAGAATTCTGCCTAAGGAGCAAGGGCAGGCAGGACCTGCCCATCT
TTTACACCAGAAACCAAATCAGTCTTCTGGGATCTGAGGTTTCCTTGCACCCTGCTGCCT
GTACATATATTTTCTTTTATCCCATAATTTATTAAATCACTCTTCTCC

Aligned organism(s): 9 entry(ies)

More info

Aligned organism(s): 9 entry(ies)

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               40-336, gnl|bosTau2|chr18 (54845138-54844842)
               

               
               40-336, gnl|canFam2|chr1 (105532508-105532249)
               

               
               40-336, gnl|echTel1|scaffold_183996 (3084-3331)
               

               
               40-336, gnl|hg17|chr19 (60384352-60384633)
               

               
               40-336, gnl|Hg17|chr19 (60384737-60384432)
               

               
               40-336, gnl|loxAfr1|scaffold_22913 (3249-3529)
               

               
               40-336, gnl|mm7|chr7 (4122046-4122310)
               

               
               40-336, gnl|panTro1|chr20 (57808312-57808593)
               

               
               40-336, gnl|rn3|chr1 (68082458-68082197)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               40-336, gnl|bosTau2|chr18 (54845138-54844842)
               

               
               40-336, gnl|canFam2|chr1 (105532508-105532249)
               

               
               40-336, gnl|echTel1|scaffold_183996 (3084-3331)
               

               
               40-336, gnl|hg17|chr19 (60384352-60384633)
               

               
               40-336, gnl|Hg17|chr19 (60384737-60384432)
               

               
               40-336, gnl|loxAfr1|scaffold_22913 (3249-3529)
               

               
               40-336, gnl|mm7|chr7 (4122046-4122310)
               

               
               40-336, gnl|panTro1|chr20 (57808312-57808593)
               

               
               40-336, gnl|rn3|chr1 (68082458-68082197)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

Help | Less info


               
               jej (0.197844)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.197844)

	40-336, gnl\|bosTau2\|chr18 (54845138-54844842)
	40-336, gnl\|canFam2\|chr1 (105532508-105532249)
	40-336, gnl\|echTel1\|scaffold_183996 (3084-3331)
	40-336, gnl\|hg17\|chr19 (60384352-60384633)
	40-336, gnl\|Hg17\|chr19 (60384737-60384432)
	40-336, gnl\|loxAfr1\|scaffold_22913 (3249-3529)
	40-336, gnl\|mm7\|chr7 (4122046-4122310)
	40-336, gnl\|panTro1\|chr20 (57808312-57808593)
	40-336, gnl\|rn3\|chr1 (68082458-68082197)