Non-Coding RNA Search

Ss1.1-rjej05b_c1.5

Sequence:


               
               AGATGGCGTTTACTTTTGAAAACTTGATAGCCACTATATCTGACTTGTTTGAAGCTGGGA
CAGAGACAACGAGCACCACTCTGAGATATGGGCTCCTCCTGATGCTGAAGCACCCAGATG
TCACAGCCAAAGTGCAGAAAGAGATTGACTCTGTGATTGAGAGACACCGAAGTCCTTGCA
TGCAGGACAGAATCCACATGCCCTATACAGATGCCGTGGTGCATGAGATCCAGAGATACA
TTGACCTGGTCCCCATTGGCCTGCCTCACACTGTGACCAGGGACATTAAATTCAGAAACT
ACCTCATCCCCAAGGGCACGACTGTATTAACATCACTGACTTCTGTGCTAAATGATGACC
AAGAATTCCCCAACCCAGAGGTGTTTGACCCTGGCCACTTCCTGGATGAGAGTGGCAACT
TTAAGAAGAGTGACTGCTTCATGCCTTTCTCAACAGGAAAACGAATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATGGCGTTTACTTTTGAAAACTTGATAGCCACTATATCTGACTTGTTTGAAGCTGGGA
CAGAGACAACGAGCACCACTCTGAGATATGGGCTCCTCCTGATGCTGAAGCACCCAGATG
TCACAGCCAAAGTGCAGAAAGAGATTGACTCTGTGATTGAGAGACACCGAAGTCCTTGCA
TGCAGGACAGAATCCACATGCCCTATACAGATGCCGTGGTGCATGAGATCCAGAGATACA
TTGACCTGGTCCCCATTGGCCTGCCTCACACTGTGACCAGGGACATTAAATTCAGAAACT
ACCTCATCCCCAAGGGCACGACTGTATTAACATCACTGACTTCTGTGCTAAATGATGACC
AAGAATTCCCCAACCCAGAGGTGTTTGACCCTGGCCACTTCCTGGATGAGAGTGGCAACT
TTAAGAAGAGTGACTGCTTCATGCCTTTCTCAACAGGAAAACGAATTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|23885|emb|CAA35915.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|23885|emb|CAA35915.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               124-315, gnl|bosTau2|chr18 (45943295-45943104)
               

               
               124-315, gnl|Hg17|chr19 (46250212-46250021)
               

               
               124-315, gnl|Mm7|chr7 (23716292-23716483)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               124-315, gnl|bosTau2|chr18 (45943295-45943104)
               

               
               124-315, gnl|Hg17|chr19 (46250212-46250021)
               

               
               124-315, gnl|Mm7|chr7 (23716292-23716483)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               duo (0.172801)
               

               
               cli (0.152812)
               

               
               lun (0.150489)
               

               
               jej (0.0989218)
               

               
               eje (0.0988338)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               duo (0.172801)
               

               
               cli (0.152812)
               

               
               lun (0.150489)
               

               
               jej (0.0989218)
               

               
               eje (0.0988338)

	124-315, gnl\|bosTau2\|chr18 (45943295-45943104)
	124-315, gnl\|Hg17\|chr19 (46250212-46250021)
	124-315, gnl\|Mm7\|chr7 (23716292-23716483)

	duo (0.172801)
	cli (0.152812)
	lun (0.150489)
	jej (0.0989218)
	eje (0.0988338)