Non-Coding RNA Search

Ss1.1-rjej07b_h23.5

Sequence:


               
               CCCAGCTGTCCTTCTCACCGTGGCTCTGGCCACCCTCCTGGCTGCAGCAGCAGGGGCACC
CATCCTCAGGCAGGGCTCTCGGAACAAGCTGCTACTGGTATCCTTCGATGGTTTCCGCTG
AAACTATGACCAGGACGTGCACACTCCCAACCTGGACGCCATGGCGCTGGACGGGGTGAA
GGCTCGCTACATGACCCCGGCTTTTGTCACCTTGACCAGCCCCTGCCACTTCACCCTGGT
CACTGGCAAATACATCGAGAACCACGGGGTGGTTCACAACATGTATTACAACACGAGCAG
CAAGGTGAAGCTGCCTTATCACACCACACTGGGCATCCAGCACTGGTGGGACAACGGCAG
CCTGCCCATCTGGATCACAGCCCAGAGGCAGGGCCTAAAGACGGGCTCCTTCTTCTACCC
GGGCGGGAATGTCACCTACCAAGGCGAGGCCGTGACGCTGAGCCGGAAGGAAGGCGTCCT
GCACAACTACAAGGACGAGGCGGAGTGGAGGGCCAACATCGACACCGTGATGAAGTGGTT
CACAGACGAGGGCCTGGACCTGGTCACGCTCTACTTTGGGGAGCCAGACTCCACGGGTCA
CAAGTACGGCCCCGAGTCGCAGGAGAGGAAGGAGATGGTGATGCAGGTGGACAGGACCGT
GGGCTACCTCCGGGACAGCATCCGGCACAGCGGCCTGGAGAGCAGCCTCAACCTGATCAT
CGTGTCCGACCACGGCATGAGCACCGTCCACAAGAAAGCCGACGACCTGGTGGAGTTCCA
CCAAATCGCTAACTTCACGTTCAAGGACATTGAGTTTGAGCTCCTAGACTACGGACCAAA
CGGGATGCTGCTCCCCAAGGAGGGGCTGCTGGAAAAGGTGTATGAGGTCCTCAAGGACGC
CCACCCCCGACTCCACGTCTACAAGAAGGAGTTCTTCCCCAAGTCCTTCCACTACGCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCAGCTGTCCTTCTCACCGTGGCTCTGGCCACCCTCCTGGCTGCAGCAGCAGGGGCACC
CATCCTCAGGCAGGGCTCTCGGAACAAGCTGCTACTGGTATCCTTCGATGGTTTCCGCTG
AAACTATGACCAGGACGTGCACACTCCCAACCTGGACGCCATGGCGCTGGACGGGGTGAA
GGCTCGCTACATGACCCCGGCTTTTGTCACCTTGACCAGCCCCTGCCACTTCACCCTGGT
CACTGGCAAATACATCGAGAACCACGGGGTGGTTCACAACATGTATTACAACACGAGCAG
CAAGGTGAAGCTGCCTTATCACACCACACTGGGCATCCAGCACTGGTGGGACAACGGCAG
CCTGCCCATCTGGATCACAGCCCAGAGGCAGGGCCTAAAGACGGGCTCCTTCTTCTACCC
GGGCGGGAATGTCACCTACCAAGGCGAGGCCGTGACGCTGAGCCGGAAGGAAGGCGTCCT
GCACAACTACAAGGACGAGGCGGAGTGGAGGGCCAACATCGACACCGTGATGAAGTGGTT
CACAGACGAGGGCCTGGACCTGGTCACGCTCTACTTTGGGGAGCCAGACTCCACGGGTCA
CAAGTACGGCCCCGAGTCGCAGGAGAGGAAGGAGATGGTGATGCAGGTGGACAGGACCGT
GGGCTACCTCCGGGACAGCATCCGGCACAGCGGCCTGGAGAGCAGCCTCAACCTGATCAT
CGTGTCCGACCACGGCATGAGCACCGTCCACAAGAAAGCCGACGACCTGGTGGAGTTCCA
CCAAATCGCTAACTTCACGTTCAAGGACATTGAGTTTGAGCTCCTAGACTACGGACCAAA
CGGGATGCTGCTCCCCAAGGAGGGGCTGCTGGAAAAGGTGTATGAGGTCCTCAAGGACGC
CCACCCCCGACTCCACGTCTACAAGAAGGAGTTCTTCCCCAAGTCCTTCCACTACGCCAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               ENPP7_RAT

Coded protein: 1 entry(ies)

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Protein identifier


               
               ENPP7_RAT

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-246, gnl|bosTau2|chr19 (46882930-46883175)
               

               
               1-246, gnl|Hg17|chr17 (75319505-75319750)
               

               
               1-246, gnl|Mm7|chr11 (119097270-119097506)
               


               
               388-960, gnl|bosTau2|chr19 (46886311-46886883)
               

               
               388-960, gnl|Hg17|chr17 (75323433-75324005)
               

               
               388-960, gnl|Mm7|chr11 (119099462-119100034)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-246, gnl|bosTau2|chr19 (46882930-46883175)
               

               
               1-246, gnl|Hg17|chr17 (75319505-75319750)
               

               
               1-246, gnl|Mm7|chr11 (119097270-119097506)
               


               
               388-960, gnl|bosTau2|chr19 (46886311-46886883)
               

               
               388-960, gnl|Hg17|chr17 (75323433-75324005)
               

               
               388-960, gnl|Mm7|chr11 (119099462-119100034)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jej (0.197844)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.197844)

	1-246, gnl\|bosTau2\|chr19 (46882930-46883175)
	1-246, gnl\|Hg17\|chr17 (75319505-75319750)
	1-246, gnl\|Mm7\|chr11 (119097270-119097506)

	388-960, gnl\|bosTau2\|chr19 (46886311-46886883)
	388-960, gnl\|Hg17\|chr17 (75323433-75324005)
	388-960, gnl\|Mm7\|chr11 (119099462-119100034)