Non-Coding RNA Search

Ss1.1-rjej08b_l20.5

Sequence:


               
               CTGGGGGACACGGAGCAGCTGATTGAAGCTCAGCAAGAAGGCAGCCAGCGGTGGCTGAAG
CAGTATCAGCAGAAGATAAAGAGGAGGTGGGCGAGCTTTGTCACCAGCTTTCCCAGCGTG
ACCCTGAGCCGGGCAGCCTCCCCACCGCCCATGCTGGGCACCACTGGCTAAGGATGCTAG
AAGCGGTGGGGGCCCTGGTTTGCTGCGCCCGGACGAGAGGGCCGTGCCTGCTGACCTACC
TCTTGGCGCCCTCTGGACGGTGGATGGGGCGCCCTCCTCCACGTGGATGACGCCGGCCTT
CCTTAGTCAAGGCCTCTGCCACCAGAACAGAGTTCAGTGAAGCCAGACCCGTGGCTGAGA
GGCTCTGGCACCTTACCTGGTTCCTGGGCCAGCCCCGCTCCCTTCTCGCCAGTTGTACTG
GTGGGCGGGGCGGGGGGCCTCCCTCCTGGACCGTGAGCCCATCCCAGGGGCAAGGACCAC
CTCCAGGCAGTCCTCACGCCGCGCTCTGTGGCTGAAAGCCCCGACTGTATTGTCGCTTGG
ATCGTCAGAGTTCCCCGGTGAAGGAAGCGGAAACTGAGGCTGGGGGCGGGGGCGGGGGGG
GGGTCACTGTCTTCGGAGTCTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGGGGACACGGAGCAGCTGATTGAAGCTCAGCAAGAAGGCAGCCAGCGGTGGCTGAAG
CAGTATCAGCAGAAGATAAAGAGGAGGTGGGCGAGCTTTGTCACCAGCTTTCCCAGCGTG
ACCCTGAGCCGGGCAGCCTCCCCACCGCCCATGCTGGGCACCACTGGCTAAGGATGCTAG
AAGCGGTGGGGGCCCTGGTTTGCTGCGCCCGGACGAGAGGGCCGTGCCTGCTGACCTACC
TCTTGGCGCCCTCTGGACGGTGGATGGGGCGCCCTCCTCCACGTGGATGACGCCGGCCTT
CCTTAGTCAAGGCCTCTGCCACCAGAACAGAGTTCAGTGAAGCCAGACCCGTGGCTGAGA
GGCTCTGGCACCTTACCTGGTTCCTGGGCCAGCCCCGCTCCCTTCTCGCCAGTTGTACTG
GTGGGCGGGGCGGGGGGCCTCCCTCCTGGACCGTGAGCCCATCCCAGGGGCAAGGACCAC
CTCCAGGCAGTCCTCACGCCGCGCTCTGTGGCTGAAAGCCCCGACTGTATTGTCGCTTGG
ATCGTCAGAGTTCCCCGGTGAAGGAAGCGGAAACTGAGGCTGGGGGCGGGGGCGGGGGGG
GGGTCACTGTCTTCGGAGTCTCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               70-513, gnl|bosTau2|chr29 (36559269-36558819)
               

               
               70-513, gnl|Hg17|chr11 (66500221-66500868)
               

               
               70-513, gnl|Mm7|chr19 (4392423-4391753)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               70-513, gnl|bosTau2|chr29 (36559269-36558819)
               

               
               70-513, gnl|Hg17|chr11 (66500221-66500868)
               

               
               70-513, gnl|Mm7|chr19 (4392423-4391753)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               ill (0.351185)
               

               
               jej (0.296765)
               

               
               nje (0.16592)
               

               
               eje (0.0988338)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.351185)
               

               
               jej (0.296765)
               

               
               nje (0.16592)
               

               
               eje (0.0988338)

	70-513, gnl\|bosTau2\|chr29 (36559269-36558819)
	70-513, gnl\|Hg17\|chr11 (66500221-66500868)
	70-513, gnl\|Mm7\|chr19 (4392423-4391753)