Non-Coding RNA Search

Ss1.1-rjej12b_a17.5

Sequence:


               
               CCCCCAGATGCTGAGCCCCAAGAGCCTTCGCCCCACAGCCCCGCGCCCTCTCACCGTGTC
CCTGAGTCCCCTGCGGTAGCCCCGGATGGGGGCAGCCCGGCAGCCGTGAGGTCCATCCTG
ACCAAGGAGCGGCGGCCTGAGGGCGGCTACAAGGCTGTGTGGTTCGGGGAGGACATTGGG
GCCGAGGCCGACGTGGTGGTCCTCAACACGCCAGGCTCGGAGGTGGATGGCGCCGGCGAC
TCGGGCAGCGAGGGCGGTGGCGACGAGGGTGCAGACGCGGGCCCGGGCGGCCGTGGCCAG
GACGCCCCGGGCACTGACTCCATCTACTTCTAGCGCTGCTTCCCCGCGGCCCCAGCGAGT
CCGGACGCCGACAATCGGCTCGGCCCCTCTCCCCAACTCCATTGCCCAGAATAAAGTGAC
ATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCCAGATGCTGAGCCCCAAGAGCCTTCGCCCCACAGCCCCGCGCCCTCTCACCGTGTC
CCTGAGTCCCCTGCGGTAGCCCCGGATGGGGGCAGCCCGGCAGCCGTGAGGTCCATCCTG
ACCAAGGAGCGGCGGCCTGAGGGCGGCTACAAGGCTGTGTGGTTCGGGGAGGACATTGGG
GCCGAGGCCGACGTGGTGGTCCTCAACACGCCAGGCTCGGAGGTGGATGGCGCCGGCGAC
TCGGGCAGCGAGGGCGGTGGCGACGAGGGTGCAGACGCGGGCCCGGGCGGCCGTGGCCAG
GACGCCCCGGGCACTGACTCCATCTACTTCTAGCGCTGCTTCCCCGCGGCCCCAGCGAGT
CCGGACGCCGACAATCGGCTCGGCCCCTCTCCCCAACTCCATTGCCCAGAATAAAGTGAC
ATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-428, gnl|bosTau2|chr29 (45793343-45792941)
               

               
               1-428, gnl|Hg17|chr11 (607676-607258)
               

               
               1-428, gnl|Mm7|chr7 (137686752-137686347)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-428, gnl|bosTau2|chr29 (45793343-45792941)
               

               
               1-428, gnl|Hg17|chr11 (607676-607258)
               

               
               1-428, gnl|Mm7|chr7 (137686752-137686347)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               jej (0.494609)
               

               
               col (0.195008)
               

               
               nje (0.16592)
               

               
               eje (0.0988338)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.494609)
               

               
               col (0.195008)
               

               
               nje (0.16592)
               

               
               eje (0.0988338)

	1-428, gnl\|bosTau2\|chr29 (45793343-45792941)
	1-428, gnl\|Hg17\|chr11 (607676-607258)
	1-428, gnl\|Mm7\|chr7 (137686752-137686347)