Non-Coding RNA Search

Ss1.1-rjej12b_c13.5

Sequence:


               
               TTGTCGTGTATTTGAAACTTTCTTTTCAACCTAGGCATGTTGGGGGGAAAGGGGGACTGA
AAGACCAAAGGAAAATTTAAAGCGGGATCAGAGGCAACAGGCCTGGATTAGGGAGCATGA
AGTGTGCAAAGGGCTCCTGGAAGTCTAGCTTCAACCCTACATACCAGCTACAGCGCATCC
CAAAGCGAGGGGGTAACGGGGAGGAGACCGAGAGGAAGGCAAAAGAACTCTAGGGACTCA
GGGTGATCTGGGTGCCCGGAAAAAGAAGCCGGAAAAAGGGTAAGACCTGCCCTGGAAAGG
AGGTGTGGAAGGTGTAGATGCGGCTGCTTGTGATGGAGTCGTAGAAGACGACTTCTCCGC
CCTCGTGATTCACGTGGACCCCCACTTTCCTGGGACGGACTGAGAGTTCCTCCCGGGTGC
CACCCTCGGTGAGCGCCTGGCAGTCGAAACCCACAATGCGCAGCACCCAGAAGCCAGTCA
AGGGTTCGATCATCAGGGGGCCCCTCCGCGTTACCAGCTCCGAGGCCACGCCCACCAAGC
AGCCCCCGCCTTCAGGCCCTTCAAGCTCCGCCTCCCAGGTCTGGCAGCCCGAGGAGAGGC
CTGGCAAGCCCAGAACACAGCGGAATGGATGGAAGCGAGCAGGGTCAGTGGGTTCAGCAC
AGCGACTTTGAGGAACAGGGTCCAGCGTCACTGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTCGTGTATTTGAAACTTTCTTTTCAACCTAGGCATGTTGGGGGGAAAGGGGGACTGA
AAGACCAAAGGAAAATTTAAAGCGGGATCAGAGGCAACAGGCCTGGATTAGGGAGCATGA
AGTGTGCAAAGGGCTCCTGGAAGTCTAGCTTCAACCCTACATACCAGCTACAGCGCATCC
CAAAGCGAGGGGGTAACGGGGAGGAGACCGAGAGGAAGGCAAAAGAACTCTAGGGACTCA
GGGTGATCTGGGTGCCCGGAAAAAGAAGCCGGAAAAAGGGTAAGACCTGCCCTGGAAAGG
AGGTGTGGAAGGTGTAGATGCGGCTGCTTGTGATGGAGTCGTAGAAGACGACTTCTCCGC
CCTCGTGATTCACGTGGACCCCCACTTTCCTGGGACGGACTGAGAGTTCCTCCCGGGTGC
CACCCTCGGTGAGCGCCTGGCAGTCGAAACCCACAATGCGCAGCACCCAGAAGCCAGTCA
AGGGTTCGATCATCAGGGGGCCCCTCCGCGTTACCAGCTCCGAGGCCACGCCCACCAAGC
AGCCCCCGCCTTCAGGCCCTTCAAGCTCCGCCTCCCAGGTCTGGCAGCCCGAGGAGAGGC
CTGGCAAGCCCAGAACACAGCGGAATGGATGGAAGCGAGCAGGGTCAGTGGGTTCAGCAC
AGCGACTTTGAGGAACAGGGTCCAGCGTCACTGTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               128-696, gnl|bosTau2|chr23 (23962688-23962117)
               

               
               128-696, gnl|Hg17|chr6 (30177529-30178098)
               

               
               128-696, gnl|Mm7|chr17 (35061726-35061219)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               128-696, gnl|bosTau2|chr23 (23962688-23962117)
               

               
               128-696, gnl|Hg17|chr6 (30177529-30178098)
               

               
               128-696, gnl|Mm7|chr17 (35061726-35061219)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cje (0.165235)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cje (0.165235)
               

               
               jej (0.0989218)

	128-696, gnl\|bosTau2\|chr23 (23962688-23962117)
	128-696, gnl\|Hg17\|chr6 (30177529-30178098)
	128-696, gnl\|Mm7\|chr17 (35061726-35061219)