Non-Coding RNA Search

Ss1.1-rjej14b_b15.5

Sequence:


               
               TCATACACCTTTCGTGATGAGTGTAATATTGAAACATGTGCAGGAAAGAGCTGAACATTT
TCTCAACCCTGAGCAGCAAATACGTGAAGGTGAAAAGCCTCTAATGTAACATTTATCTTT
TTTTCCAATGAGATTAAATATCGTAAAGCATAAATGCAAGTAACTGTTCCCAACTGACCT
AAAGTCAATAAAACATTATATTTAAATGTTTTTCTTAGAGTTCCCTGTCACTGGTGTGGC
TCTGGTTACCACTGTGGCAGGGGTTCGATCCATGGCCCGGGAACTTCCATGTGCTGCAGG
CATAGCCCAAATAAATAAATAAATAAATAAAATTTTCTTACATTTTTCCTAACCAGTTAC
TCAACAAGTTTTTGTTTTAGTTGCTTTAGAGGAGAACAAGAATATAATAATAAAGTACAG
AAGTGTGAGAAACTATTACAATTAAGGCTAAATGGAGTTCCCTTGTGGTTAAGGATCCAG
TGTCACTGCAGTAGCTGGAGTCACTGCTCTGTCACTATAGATTCAGTCCCTGGCCTGGGA
ACTTCCACATACTGCAGGCATGGCCAAAAAAAATAAAAAATAAAAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCATACACCTTTCGTGATGAGTGTAATATTGAAACATGTGCAGGAAAGAGCTGAACATTT
TCTCAACCCTGAGCAGCAAATACGTGAAGGTGAAAAGCCTCTAATGTAACATTTATCTTT
TTTTCCAATGAGATTAAATATCGTAAAGCATAAATGCAAGTAACTGTTCCCAACTGACCT
AAAGTCAATAAAACATTATATTTAAATGTTTTTCTTAGAGTTCCCTGTCACTGGTGTGGC
TCTGGTTACCACTGTGGCAGGGGTTCGATCCATGGCCCGGGAACTTCCATGTGCTGCAGG
CATAGCCCAAATAAATAAATAAATAAATAAAATTTTCTTACATTTTTCCTAACCAGTTAC
TCAACAAGTTTTTGTTTTAGTTGCTTTAGAGGAGAACAAGAATATAATAATAAAGTACAG
AAGTGTGAGAAACTATTACAATTAAGGCTAAATGGAGTTCCCTTGTGGTTAAGGATCCAG
TGTCACTGCAGTAGCTGGAGTCACTGCTCTGTCACTATAGATTCAGTCCCTGGCCTGGGA
ACTTCCACATACTGCAGGCATGGCCAAAAAAAATAAAAAATAAAAAAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-222, gnl|bosTau2|chr25 (17960285-17960063)
               

               
               2-222, gnl|Hg17|chr16 (21901967-21902186)
               

               
               2-222, gnl|Mm7|chr7 (116581361-116581573)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-222, gnl|bosTau2|chr25 (17960285-17960063)
               

               
               2-222, gnl|Hg17|chr16 (21901967-21902186)
               

               
               2-222, gnl|Mm7|chr7 (116581361-116581573)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cst (0.140036)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.140036)
               

               
               jej (0.0989218)

	2-222, gnl\|bosTau2\|chr25 (17960285-17960063)
	2-222, gnl\|Hg17\|chr16 (21901967-21902186)
	2-222, gnl\|Mm7\|chr7 (116581361-116581573)