Ss1.1-rjej14b_f2.5
|
GGGATGATCAACAAGGAAGCCGGTACAGTGTAATTCCACAAATTCAGAAGGTGTGTGAAG
TTGTTGATGGGTTCATCTATGTTGCTAATGCTGAAGCTCATAAAAGACACGAGTGGCAAG
ATGAATTTTCTCGCATTATGGCAATGACAGATCCAGCTTTTGGATCTTCAGGAAGACCAA
TGCTGGTTTTATCTTGTATTTCTCAAGCTAATGTAAAAAGAATGCCCTGTTTTTATTTGG
CCCATGAGCTGCATCTGAATCATCTAAACCACCCATGGATGGTTCAAGATACAGAGGCTG
AAACTCTGACTGGTTTTTCGAATGGCATTCAATGGATTCTTGAAGAAGTAGAATCTAAGC
ATGCAAGATGATCCTCCTTTTAGACCTTGAGAACTGAAAGCATTTGAAACTGGCTACTAA
AGTCATGATGTGGATGTTTGCTCAGTCAGCTTTCTGCCCTGCCTTTTTGCAGGTAGGCTT
TCTACTGGATAGCTGTAACTGCTGTGTTTTTTTTTTTTTTTTTAAAAAAAAATTTTTAAC
TTTTAACTGGAAACCAGTTACAAAAAACAAGTTTCATTGCTAGTTTTTACCCCCAAAATG
AACCTTTAAAAATTTTTGGATAACTTTTATTTTTAAAGTTTTAAATTCTGAAAAAAAAGG
TGGGGCCTTTTTCATTTTTGGGGACTTCGGGGCTTTTCAGTTAAAAAATTTGCCCTAGGG
GGGGAAAAAAAATTGGCTAAGTTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGGATGATCAACAAGGAAGCCGGTACAGTGTAATTCCACAAATTCAGAAGGTGTGTGAAG
TTGTTGATGGGTTCATCTATGTTGCTAATGCTGAAGCTCATAAAAGACACGAGTGGCAAG
ATGAATTTTCTCGCATTATGGCAATGACAGATCCAGCTTTTGGATCTTCAGGAAGACCAA
TGCTGGTTTTATCTTGTATTTCTCAAGCTAATGTAAAAAGAATGCCCTGTTTTTATTTGG
CCCATGAGCTGCATCTGAATCATCTAAACCACCCATGGATGGTTCAAGATACAGAGGCTG
AAACTCTGACTGGTTTTTCGAATGGCATTCAATGGATTCTTGAAGAAGTAGAATCTAAGC
ATGCAAGATGATCCTCCTTTTAGACCTTGAGAACTGAAAGCATTTGAAACTGGCTACTAA
AGTCATGATGTGGATGTTTGCTCAGTCAGCTTTCTGCCCTGCCTTTTTGCAGGTAGGCTT
TCTACTGGATAGCTGTAACTGCTGTGTTTTTTTTTTTTTTTTTAAAAAAAAATTTTTAAC
TTTTAACTGGAAACCAGTTACAAAAAACAAGTTTCATTGCTAGTTTTTACCCCCAAAATG
AACCTTTAAAAATTTTTGGATAACTTTTATTTTTAAAGTTTTAAATTCTGAAAAAAAAGG
TGGGGCCTTTTTCATTTTTGGGGACTTCGGGGCTTTTCAGTTAAAAAATTTGCCCTAGGG
GGGGAAAAAAAATTGGCTAAGTTT
|
|
gi|61866642|ref|XP_614766.1| |
Protein identifier
|
gi|61866642|ref|XP_614766.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-106, gnl|bosTau2|chr20 (19449924-19449819) |
|
1-106, gnl|canFam2|chr4 (70855195-70855007) |
|
1-106, gnl|danRer3|chr8 (26724412-26724233) |
|
1-106, gnl|dasNov1|scaffold_39526 (47353-47541) |
|
1-106, gnl|echTel1|scaffold_263059 (1248-1060) |
|
1-106, gnl|fr1|chrUn (24691380-24691195) |
|
1-106, gnl|galGal2|chrZ (6361410-6361601) |
|
1-106, gnl|hg17|chr5 (41969985-41970173) |
|
1-106, gnl|Hg17|chr5 (41970063-41970168) |
|
1-106, gnl|loxAfr1|scaffold_1154 (18467-18279) |
|
1-106, gnl|mm7|chr15 (3799184-3798992) |
|
1-106, gnl|Mm7|chr15 (3799100-3798995) |
|
1-106, gnl|monDom2|scaffold_20 (28861614-28861426) |
|
1-106, gnl|panTro1|chr4 (74585489-74585301) |
|
1-106, gnl|rheMac2|chr6 (41802103-41802291) |
|
1-106, gnl|rn3|chr2 (53805423-53805232) |
|
1-106, gnl|tetNig1|chr12 (8757326-8757511) |
|
1-106, gnl|xenTro1|scaffold_794 (448238-448050) |
| |
|
281-744, gnl|bosTau2|chr20 (19445488-19445018) |
|
281-744, gnl|Hg17|chr5 (41977050-41977511) |
|
281-744, gnl|Mm7|chr15 (3793452-3793045) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-106, gnl|bosTau2|chr20 (19449924-19449819) |
|
1-106, gnl|canFam2|chr4 (70855195-70855007) |
|
1-106, gnl|danRer3|chr8 (26724412-26724233) |
|
1-106, gnl|dasNov1|scaffold_39526 (47353-47541) |
|
1-106, gnl|echTel1|scaffold_263059 (1248-1060) |
|
1-106, gnl|fr1|chrUn (24691380-24691195) |
|
1-106, gnl|galGal2|chrZ (6361410-6361601) |
|
1-106, gnl|hg17|chr5 (41969985-41970173) |
|
1-106, gnl|Hg17|chr5 (41970063-41970168) |
|
1-106, gnl|loxAfr1|scaffold_1154 (18467-18279) |
|
1-106, gnl|mm7|chr15 (3799184-3798992) |
|
1-106, gnl|Mm7|chr15 (3799100-3798995) |
|
1-106, gnl|monDom2|scaffold_20 (28861614-28861426) |
|
1-106, gnl|panTro1|chr4 (74585489-74585301) |
|
1-106, gnl|rheMac2|chr6 (41802103-41802291) |
|
1-106, gnl|rn3|chr2 (53805423-53805232) |
|
1-106, gnl|tetNig1|chr12 (8757326-8757511) |
|
1-106, gnl|xenTro1|scaffold_794 (448238-448050) |
| |
|
281-744, gnl|bosTau2|chr20 (19445488-19445018) |
|
281-744, gnl|Hg17|chr5 (41977050-41977511) |
|
281-744, gnl|Mm7|chr15 (3793452-3793045) |
|
lnt (0.142308) |
|
jej (0.0989218) |
|
lnt (0.142308) |
|
jej (0.0989218) |