Non-Coding RNA Search

Ss1.1-rjej15b_b23.5

Sequence:


               
               CCTGGAGGGCAGAGCCCAGCATATAAAGGGCAAAGAGCTGCCCCCCTCCCACCCCCCAGT
GTGTGGGTGGATGCTCTGCAAGCCCAGGCCACCCTGCTCCTGTTACCTCCCACTCCCCTA
GCTGGGGAGTAAACTCTGCTCTACAGTTGCCTTTCCCAGTTGCAGGTAACAAGAGTGAAT
CTCTGTGTTTCTCCATAGCAGTGCTTTCCCTCCCCCTCCCCCCAAAGAGCTTTAAAGGTT
TTCATCACATCTGGTCTGTTCTCTGGACACCAGGCATCCATGGCTCTGCAGCAGGAAGAG
GTTCTAAGCAGAGGCTGTGAGTGGGTTTGTCGGTCTCCCTTGGGAACAGGGATGTCAGTG
TTTCCAGTCCCCATTTAGGAGGTGTCCAGCGTCACAGTGCCTGGAATTGAGATGAGAAGT
GCCAGCCCACTCGGTCCCAGAGGCAGGCGTTGGACACTGGGTTGGCCTCGAGTCCCTGGA
TGTGCTGTGCCTGAGCTGGGTGAGGCCCCGGGCGGCCCAGCCTGGCAGGGTGGGCACCTC
TTCCGCCCCCACCCAGGGAGATGTGTCCCCACAGTGTGCCGGACAGCAGAGACCCAGCCA
CTGCGCAGCCCCTTCCTGTGCCTGGACCTTACCTACGTCAGCTCACTGCTCCAGGAGCTC
GGCTTCCCTGGGGACAAAGTGCTGAAGTTGGCCCGGAAGATNACAACGTGGAGACCAGTT
GGGCCCTGGGGGCCACTTTTCATTACATCGACTCCTTGAGCAGACGCAGGAGCCCCGCCC
CCTAGCAGCTGCCGGCCCCCAGACGTGTCTCTGTGAGGACAAGCCCGCTGGGGACTCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGGAGGGCAGAGCCCAGCATATAAAGGGCAAAGAGCTGCCCCCCTCCCACCCCCCAGT
GTGTGGGTGGATGCTCTGCAAGCCCAGGCCACCCTGCTCCTGTTACCTCCCACTCCCCTA
GCTGGGGAGTAAACTCTGCTCTACAGTTGCCTTTCCCAGTTGCAGGTAACAAGAGTGAAT
CTCTGTGTTTCTCCATAGCAGTGCTTTCCCTCCCCCTCCCCCCAAAGAGCTTTAAAGGTT
TTCATCACATCTGGTCTGTTCTCTGGACACCAGGCATCCATGGCTCTGCAGCAGGAAGAG
GTTCTAAGCAGAGGCTGTGAGTGGGTTTGTCGGTCTCCCTTGGGAACAGGGATGTCAGTG
TTTCCAGTCCCCATTTAGGAGGTGTCCAGCGTCACAGTGCCTGGAATTGAGATGAGAAGT
GCCAGCCCACTCGGTCCCAGAGGCAGGCGTTGGACACTGGGTTGGCCTCGAGTCCCTGGA
TGTGCTGTGCCTGAGCTGGGTGAGGCCCCGGGCGGCCCAGCCTGGCAGGGTGGGCACCTC
TTCCGCCCCCACCCAGGGAGATGTGTCCCCACAGTGTGCCGGACAGCAGAGACCCAGCCA
CTGCGCAGCCCCTTCCTGTGCCTGGACCTTACCTACGTCAGCTCACTGCTCCAGGAGCTC
GGCTTCCCTGGGGACAAAGTGCTGAAGTTGGCCCGGAAGATNACAACGTGGAGACCAGTT
GGGCCCTGGGGGCCACTTTTCATTACATCGACTCCTTGAGCAGACGCAGGAGCCCCGCCC
CCTAGCAGCTGCCGGCCCCCAGACGTGTCTCTGTGAGGACAAGCCCGCTGGGGACTCCCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               545-687, gnl|bosTau2|chr13 (26068530-26068672)
               

               
               545-687, gnl|Hg17|chr20 (25153784-25153953)
               

               
               545-687, gnl|Mm7|chr2 (150511121-150511261)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               545-687, gnl|bosTau2|chr13 (26068530-26068672)
               

               
               545-687, gnl|Hg17|chr20 (25153784-25153953)
               

               
               545-687, gnl|Mm7|chr2 (150511121-150511261)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cty (0.10408)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)
               

               
               jej (0.0989218)

	545-687, gnl\|bosTau2\|chr13 (26068530-26068672)
	545-687, gnl\|Hg17\|chr20 (25153784-25153953)
	545-687, gnl\|Mm7\|chr2 (150511121-150511261)