Non-Coding RNA Search

Ss1.1-rjej23b_g15.5

Sequence:


               
               GGCAGCCTTCTGAGTCTGGGCGGCACCTGCTCTCTGAGCCCAACACTCCTCTGTCTCCAC
AAGGCCCCGGCGATGTCTTCTTCCCCTCCCTAGACCCTGTCCCCGACTCCCCAAACTCCG
AGGCCGTCTAGACCAGCTGGGTGCCAGTAGGCAGCTGTGGCTGGGCCTGGGGCAGGTGCA
TTTGAGCCAGGGCTGGCCCTCTGAGTGGTCCCTTGGCCTTGGCCCCGTTTCCTGCCTCCT
GCTCCAAGCCCAGATTCTTTGAGGTCCCCCTGATGGTCTGACCTTCGACCCCTCGTGGCA
GAAGGGAGAAGGTACTGGATCACTCAATCCCTGTCTCAAAGACAGTCAGGTGCTGGGAAC
CCACCCCAGAGGCCTGAAATTCACCAGCTACTGATGCCAAATGACCTACATCCCAGAAGC
CTCAGAACTGTCAGCTTCGTGGCAGCCTCTCTCCCTGGGACATGAGCCTTGGGACCTGTC
GGTGCAGGTGGGCACTGGACATGCCTCTCAGCGCCCCCCTCCGGGCATGAGACACAAGAC
ACGCTGTGGAGAGACTCCTCCCCACTGTGATGACCCAGCTCCCCCATCTCACCTGAGGCT
GCTCATCTGTCAGACTCACTCTTTGTACCCAGGGGGCTCCGGGGCTGGGCCTGCCTGGCC
CTGGGCCACGGGGGCCTTTCCTGGCTACCTCCCAGCAGCAAACTCACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCAGCCTTCTGAGTCTGGGCGGCACCTGCTCTCTGAGCCCAACACTCCTCTGTCTCCAC
AAGGCCCCGGCGATGTCTTCTTCCCCTCCCTAGACCCTGTCCCCGACTCCCCAAACTCCG
AGGCCGTCTAGACCAGCTGGGTGCCAGTAGGCAGCTGTGGCTGGGCCTGGGGCAGGTGCA
TTTGAGCCAGGGCTGGCCCTCTGAGTGGTCCCTTGGCCTTGGCCCCGTTTCCTGCCTCCT
GCTCCAAGCCCAGATTCTTTGAGGTCCCCCTGATGGTCTGACCTTCGACCCCTCGTGGCA
GAAGGGAGAAGGTACTGGATCACTCAATCCCTGTCTCAAAGACAGTCAGGTGCTGGGAAC
CCACCCCAGAGGCCTGAAATTCACCAGCTACTGATGCCAAATGACCTACATCCCAGAAGC
CTCAGAACTGTCAGCTTCGTGGCAGCCTCTCTCCCTGGGACATGAGCCTTGGGACCTGTC
GGTGCAGGTGGGCACTGGACATGCCTCTCAGCGCCCCCCTCCGGGCATGAGACACAAGAC
ACGCTGTGGAGAGACTCCTCCCCACTGTGATGACCCAGCTCCCCCATCTCACCTGAGGCT
GCTCATCTGTCAGACTCACTCTTTGTACCCAGGGGGCTCCGGGGCTGGGCCTGCCTGGCC
CTGGGCCACGGGGGCCTTTCCTGGCTACCTCCCAGCAGCAAACTCACT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               92-660, gnl|bosTau2|chr28 (21253063-21253627)
               

               
               92-660, gnl|Hg17|chr10 (73181055-73180494)
               

               
               92-660, gnl|Mm7|chr10 (59887095-59887659)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               92-660, gnl|bosTau2|chr28 (21253063-21253627)
               

               
               92-660, gnl|Hg17|chr10 (73181055-73180494)
               

               
               92-660, gnl|Mm7|chr10 (59887095-59887659)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               nlu (0.383362)
               

               
               cov (0.132153)
               

               
               cty (0.10408)
               

               
               jej (0.0989218)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.383362)
               

               
               cov (0.132153)
               

               
               cty (0.10408)
               

               
               jej (0.0989218)

	92-660, gnl\|bosTau2\|chr28 (21253063-21253627)
	92-660, gnl\|Hg17\|chr10 (73181055-73180494)
	92-660, gnl\|Mm7\|chr10 (59887095-59887659)