Ss1.1-rjej26b_a12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGAGGGAGAGATTCAGTGCCATTTTCAACTGAGCTCTGGACACAGAACTTCGGCCATGA AGGTTGCAAGCATCTTTCTTCTCAGTGCCTTGGCTCTGTTGAGTCTCTCAGGTTACACTA GAGCCACCTCCCCGCAAAGAGAGGCTACATGTACCAGTGAAGTGAGTGGTTGTCCCAAGA TCTACAACCCTGTCTGCGGGACGGATGGAATTACTTATTCTAATGAGTGCGTGTTATGTT CTGAAAATAAGAAGCGCCAGACTCCTGTCCTCATTCAAAAATCTGGGCCTTGCTGAGAAC CAAGGTTCTGAAATCCTGTAAGAACACTAGGACACATGTCTGGCCTGACTGTTGAATAAA ATGCATCTAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGAGGGAGAGATTCAGTGCCATTTTCAACTGAGCTCTGGACACAGAACTTCGGCCATGA AGGTTGCAAGCATCTTTCTTCTCAGTGCCTTGGCTCTGTTGAGTCTCTCAGGTTACACTA GAGCCACCTCCCCGCAAAGAGAGGCTACATGTACCAGTGAAGTGAGTGGTTGTCCCAAGA TCTACAACCCTGTCTGCGGGACGGATGGAATTACTTATTCTAATGAGTGCGTGTTATGTT CTGAAAATAAGAAGCGCCAGACTCCTGTCCTCATTCAAAAATCTGGGCCTTGCTGAGAAC CAAGGTTCTGAAATCCTGTAAGAACACTAGGACACATGTCTGGCCTGACTGTTGAATAAA ATGCATCTAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 13-113, gnl|bosTau2|chr7 (41094486-41094386) | |
| 13-113, gnl|canFam2|chr2 (44969026-44969631) | |
| 13-113, gnl|hg17|chr5 (147191251-147191974) | |
| 13-113, gnl|Hg17|chr5 (147191377-147191277) | |
| 13-113, gnl|mm7|chr18 (44114552-44115204) | |
| 13-113, gnl|Mm7|chr18 (44114678-44114581) | |
| 13-113, gnl|oryCun1|scaffold_84551 (1565-919) | |
| 13-113, gnl|panTro1|chr4 (154084996-154085722) | |
| 13-113, gnl|rheMac2|chr6 (144275861-144276588) | |
| 13-113, gnl|rn3|chr18 (37183403-37184051) | |
| 142-251, gnl|bosTau2|chr7 (41091126-41091017) | |
| 142-251, gnl|canFam2|chr2 (44964017-44964130) | |
| 142-251, gnl|dasNov1|scaffold_121665 (3248-3135) | |
| 142-251, gnl|hg17|chr5 (147187755-147187868) | |
| 142-251, gnl|Hg17|chr5 (147187886-147187777) | |
| 142-251, gnl|mm7|chr18 (44110997-44111102) | |
| 142-251, gnl|Mm7|chr18 (44111120-44111011) | |
| 142-251, gnl|oryCun1|scaffold_84551 (5181-5068) | |
| 142-251, gnl|panTro1|chr4 (154081495-154081608) | |
| 142-251, gnl|rheMac2|chr6 (144272530-144272643) | |
| 142-251, gnl|rn3|chr18 (37179372-37179485) | |
| 255-373, gnl|bosTau2|chr7 (41087599-41087481) | |
| 255-373, gnl|canFam2|chr2 (44960375-44960689) | |
| 255-373, gnl|echTel1|scaffold_277714 (43835-44146) | |
| 255-373, gnl|hg17|chr5 (147184247-147184565) | |
| 255-373, gnl|Hg17|chr5 (147184458-147184341) | |
| 255-373, gnl|loxAfr1|scaffold_4918 (127945-128261) | |
| 255-373, gnl|mm7|chr18 (44105480-44105810) | |
| 255-373, gnl|Mm7|chr18 (44105689-44105572) | |
| 255-373, gnl|oryCun1|scaffold_198610 (41647-41992) | |
| 255-373, gnl|panTro1|chr4 (154077995-154078313) | |
| 255-373, gnl|rheMac2|chr6 (144268980-144269294) | |
| 255-373, gnl|rn3|chr18 (37170678-37171008) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 13-113, gnl|bosTau2|chr7 (41094486-41094386) | |
| 13-113, gnl|canFam2|chr2 (44969026-44969631) | |
| 13-113, gnl|hg17|chr5 (147191251-147191974) | |
| 13-113, gnl|Hg17|chr5 (147191377-147191277) | |
| 13-113, gnl|mm7|chr18 (44114552-44115204) | |
| 13-113, gnl|Mm7|chr18 (44114678-44114581) | |
| 13-113, gnl|oryCun1|scaffold_84551 (1565-919) | |
| 13-113, gnl|panTro1|chr4 (154084996-154085722) | |
| 13-113, gnl|rheMac2|chr6 (144275861-144276588) | |
| 13-113, gnl|rn3|chr18 (37183403-37184051) | |
| 142-251, gnl|bosTau2|chr7 (41091126-41091017) | |
| 142-251, gnl|canFam2|chr2 (44964017-44964130) | |
| 142-251, gnl|dasNov1|scaffold_121665 (3248-3135) | |
| 142-251, gnl|hg17|chr5 (147187755-147187868) | |
| 142-251, gnl|Hg17|chr5 (147187886-147187777) | |
| 142-251, gnl|mm7|chr18 (44110997-44111102) | |
| 142-251, gnl|Mm7|chr18 (44111120-44111011) | |
| 142-251, gnl|oryCun1|scaffold_84551 (5181-5068) | |
| 142-251, gnl|panTro1|chr4 (154081495-154081608) | |
| 142-251, gnl|rheMac2|chr6 (144272530-144272643) | |
| 142-251, gnl|rn3|chr18 (37179372-37179485) | |
| 255-373, gnl|bosTau2|chr7 (41087599-41087481) | |
| 255-373, gnl|canFam2|chr2 (44960375-44960689) | |
| 255-373, gnl|echTel1|scaffold_277714 (43835-44146) | |
| 255-373, gnl|hg17|chr5 (147184247-147184565) | |
| 255-373, gnl|Hg17|chr5 (147184458-147184341) | |
| 255-373, gnl|loxAfr1|scaffold_4918 (127945-128261) | |
| 255-373, gnl|mm7|chr18 (44105480-44105810) | |
| 255-373, gnl|Mm7|chr18 (44105689-44105572) | |
| 255-373, gnl|oryCun1|scaffold_198610 (41647-41992) | |
| 255-373, gnl|panTro1|chr4 (154077995-154078313) | |
| 255-373, gnl|rheMac2|chr6 (144268980-144269294) | |
| 255-373, gnl|rn3|chr18 (37170678-37171008) |
| Expressed library(ies): 10 entry(ies) | More info |
| Expressed library(ies): 10 entry(ies) | Help | Less info |
| jej (6.13315) | |
| duo (5.18403) | |
| sin (1.57453) | |
| nje (1.16144) | |
| cje (0.991408) | |
| col (0.780031) | |
| ill (0.526778) | |
| nco (0.323468) | |
| eje (0.197668) | |
| lin (0.145603) |
| Expressed library(ies): 10 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (6.13315) | |
| duo (5.18403) | |
| sin (1.57453) | |
| nje (1.16144) | |
| cje (0.991408) | |
| col (0.780031) | |
| ill (0.526778) | |
| nco (0.323468) | |
| eje (0.197668) | |
| lin (0.145603) |