Ss1.1-rjej26b_o8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGTACAGTTCAGAGTAGGGAAACCGTATTTTTACTGAATCAGCTGGAGACTATGGCAT TTGATGGTGCCTGGAAGATAGACCGCAATGAGAACTATGACAAGTTCATGGAAAAAATGG GTATTAACGTGGTAAAGAGGAAACTTGCAGCTCATGACAATTTGAAACTGATAATTACAC AAGAAGGAAATAAATTCACAGTCAAAGAATCAAGCACTTTTCGAAACATTGAAATTGTTT TTGAGCTTGGTGTCACTTTTAACTACAGCCTCGCAGACGGAACTGAACTCACTGGGAATT GGAACTTAGAGGGAAATAAACTTGTTGGAAAATTTCAACGAGTGGATAATGGAAAAGAGT TAAATACTGTCCGAGAAATTATCGGGGATGAAATGGTCCAGACTTACGTGTATGAAGGAG TAGAAGCCAAGAGGATCTTCAAAAAGAATTGAGCATTGTTCTTGGAGCACAGCCCAGAAC ACAAATTAGATGGAAAAATCTATATTGAACCAGAACTGTTTTCCTCTCCTCATCAAGCAT AAGGTTGCTGACTGATTAGTCCTTTTATAAACATTGGCTAATGGCTTATATTTCCAGTAT TGCCAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGTACAGTTCAGAGTAGGGAAACCGTATTTTTACTGAATCAGCTGGAGACTATGGCAT TTGATGGTGCCTGGAAGATAGACCGCAATGAGAACTATGACAAGTTCATGGAAAAAATGG GTATTAACGTGGTAAAGAGGAAACTTGCAGCTCATGACAATTTGAAACTGATAATTACAC AAGAAGGAAATAAATTCACAGTCAAAGAATCAAGCACTTTTCGAAACATTGAAATTGTTT TTGAGCTTGGTGTCACTTTTAACTACAGCCTCGCAGACGGAACTGAACTCACTGGGAATT GGAACTTAGAGGGAAATAAACTTGTTGGAAAATTTCAACGAGTGGATAATGGAAAAGAGT TAAATACTGTCCGAGAAATTATCGGGGATGAAATGGTCCAGACTTACGTGTATGAAGGAG TAGAAGCCAAGAGGATCTTCAAAAAGAATTGAGCATTGTTCTTGGAGCACAGCCCAGAAC ACAAATTAGATGGAAAAATCTATATTGAACCAGAACTGTTTTCCTCTCCTCATCAAGCAT AAGGTTGCTGACTGATTAGTCCTTTTATAAACATTGGCTAATGGCTTATATTTCCAGTAT TGCCAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 120-294, gnl|bosTau2|chr6 (3090682-3090508) | |
| 120-294, gnl|canFam2|chr32 (41168221-41168430) | |
| 120-294, gnl|danRer3|chr1 (25133933-25134134) | |
| 120-294, gnl|dasNov1|scaffold_194468 (3027-3237) | |
| 120-294, gnl|fr1|chrUn (117577923-117578115) | |
| 120-294, gnl|hg17|chr4 (120599417-120599629) | |
| 120-294, gnl|Hg17|chr4 (120599601-120599427) | |
| 120-294, gnl|loxAfr1|scaffold_7676 (62181-61976) | |
| 120-294, gnl|mm7|chr3 (122736192-122735978) | |
| 120-294, gnl|Mm7|chr3 (122736005-122736179) | |
| 120-294, gnl|monDom2|scaffold_32 (7994471-7994271) | |
| 120-294, gnl|oryCun1|scaffold_123306 (6424-6216) | |
| 120-294, gnl|panTro1|chr3 (137200057-137200268) | |
| 120-294, gnl|rheMac2|chr5 (111895892-111896101) | |
| 120-294, gnl|rn3|chr2 (219556080-219555873) | |
| 120-294, gnl|tetNig1|chrUn_random (8307805-8307601) | |
| 120-294, gnl|xenTro1|scaffold_310 (606408-606189) | |
| 399-622, gnl|bosTau2|chr6 (3089038-3088816) | |
| 399-622, gnl|canFam2|chr32 (41166022-41166259) | |
| 399-622, gnl|dasNov1|scaffold_194468 (682-942) | |
| 399-622, gnl|hg17|chr4 (120597598-120597849) | |
| 399-622, gnl|Hg17|chr4 (120597852-120597639) | |
| 399-622, gnl|loxAfr1|scaffold_47791 (1566-1357) | |
| 399-622, gnl|mm7|chr3 (122738735-122738504) | |
| 399-622, gnl|Mm7|chr3 (122738499-122738689) | |
| 399-622, gnl|monDom2|scaffold_32 (7997611-7997343) | |
| 399-622, gnl|oryCun1|scaffold_148703 (12763-12512) | |
| 399-622, gnl|panTro1|chr3 (137198229-137198480) | |
| 399-622, gnl|rheMac2|chr5 (111894068-111894319) | |
| 399-622, gnl|rn3|chr2 (219568188-219567958) | |
| 399-622, gnl|xenTro1|scaffold_310 (608411-608190) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 120-294, gnl|bosTau2|chr6 (3090682-3090508) | |
| 120-294, gnl|canFam2|chr32 (41168221-41168430) | |
| 120-294, gnl|danRer3|chr1 (25133933-25134134) | |
| 120-294, gnl|dasNov1|scaffold_194468 (3027-3237) | |
| 120-294, gnl|fr1|chrUn (117577923-117578115) | |
| 120-294, gnl|hg17|chr4 (120599417-120599629) | |
| 120-294, gnl|Hg17|chr4 (120599601-120599427) | |
| 120-294, gnl|loxAfr1|scaffold_7676 (62181-61976) | |
| 120-294, gnl|mm7|chr3 (122736192-122735978) | |
| 120-294, gnl|Mm7|chr3 (122736005-122736179) | |
| 120-294, gnl|monDom2|scaffold_32 (7994471-7994271) | |
| 120-294, gnl|oryCun1|scaffold_123306 (6424-6216) | |
| 120-294, gnl|panTro1|chr3 (137200057-137200268) | |
| 120-294, gnl|rheMac2|chr5 (111895892-111896101) | |
| 120-294, gnl|rn3|chr2 (219556080-219555873) | |
| 120-294, gnl|tetNig1|chrUn_random (8307805-8307601) | |
| 120-294, gnl|xenTro1|scaffold_310 (606408-606189) | |
| 399-622, gnl|bosTau2|chr6 (3089038-3088816) | |
| 399-622, gnl|canFam2|chr32 (41166022-41166259) | |
| 399-622, gnl|dasNov1|scaffold_194468 (682-942) | |
| 399-622, gnl|hg17|chr4 (120597598-120597849) | |
| 399-622, gnl|Hg17|chr4 (120597852-120597639) | |
| 399-622, gnl|loxAfr1|scaffold_47791 (1566-1357) | |
| 399-622, gnl|mm7|chr3 (122738735-122738504) | |
| 399-622, gnl|Mm7|chr3 (122738499-122738689) | |
| 399-622, gnl|monDom2|scaffold_32 (7997611-7997343) | |
| 399-622, gnl|oryCun1|scaffold_148703 (12763-12512) | |
| 399-622, gnl|panTro1|chr3 (137198229-137198480) | |
| 399-622, gnl|rheMac2|chr5 (111894068-111894319) | |
| 399-622, gnl|rn3|chr2 (219568188-219567958) | |
| 399-622, gnl|xenTro1|scaffold_310 (608411-608190) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| sin (9.97201) | |
| jej (5.04501) | |
| duo (3.62882) | |
| nje (2.4888) | |
| cje (0.330469) | |
| eje (0.0988338) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sin (9.97201) | |
| jej (5.04501) | |
| duo (3.62882) | |
| nje (2.4888) | |
| cje (0.330469) | |
| eje (0.0988338) |