Ss1.1-rjej28b_f13.5
|
CCCAAACTCTACACCCCGCCCTCCCTCTCTGGGCCTTCATCTGTCCACCAGCTGCTGCTG
CGACCAGAGAGCATCTGGCCCACGTTGGGTCCCCAGTGCTTTCTCCTGCACAAAAGAGTG
GACGGCGTGCCCCTGCGAGGGGCCGGAGGGAAGGGACAGGCTGGGGAACTGGCTTTTTAC
ACCCCCCGTGTGCGGGGTCGCTCGCCCCCAGGGCTGCCTCAGATTTTGTATAAACCCGGA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCCAAACTCTACACCCCGCCCTCCCTCTCTGGGCCTTCATCTGTCCACCAGCTGCTGCTG
CGACCAGAGAGCATCTGGCCCACGTTGGGTCCCCAGTGCTTTCTCCTGCACAAAAGAGTG
GACGGCGTGCCCCTGCGAGGGGCCGGAGGGAAGGGACAGGCTGGGGAACTGGCTTTTTAC
ACCCCCCGTGTGCGGGGTCGCTCGCCCCCAGGGCTGCCTCAGATTTTGTATAAACCCGGA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
31-149, + strand, RNAmicro p=0.999522 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
31-149, + strand, RNAmicro p=0.999522 |
Human gene identifier and UTR site,
human gene reading direction
|
15-232, gnl|bosTau2|chr11 (77993044-77992830) |
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15-232, gnl|canFam2|chr9 (59428856-59428390) |
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15-232, gnl|dasNov1|scaffold_1926 (46583-47048) |
|
15-232, gnl|galGal2|chr17 (91643-91092) |
|
15-232, gnl|hg17|chr9 (127060615-127061059) |
|
15-232, gnl|Hg17|chr9 (127060855-127061057) |
|
15-232, gnl|loxAfr1|scaffold_24002 (5172-4706) |
|
15-232, gnl|mm7|chr2 (33144980-33144521) |
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15-232, gnl|Mm7|chr2 (33144731-33144521) |
|
15-232, gnl|monDom2|scaffold_38 (22736341-22736881) |
|
15-232, gnl|oryCun1|scaffold_193623 (7831-7345) |
|
15-232, gnl|panTro1|chr11 (111873300-111873745) |
|
15-232, gnl|rheMac2|chr15 (99365792-99365334) |
|
15-232, gnl|rn3|chr3 (12043526-12043076) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
15-232, gnl|bosTau2|chr11 (77993044-77992830) |
|
15-232, gnl|canFam2|chr9 (59428856-59428390) |
|
15-232, gnl|dasNov1|scaffold_1926 (46583-47048) |
|
15-232, gnl|galGal2|chr17 (91643-91092) |
|
15-232, gnl|hg17|chr9 (127060615-127061059) |
|
15-232, gnl|Hg17|chr9 (127060855-127061057) |
|
15-232, gnl|loxAfr1|scaffold_24002 (5172-4706) |
|
15-232, gnl|mm7|chr2 (33144980-33144521) |
|
15-232, gnl|Mm7|chr2 (33144731-33144521) |
|
15-232, gnl|monDom2|scaffold_38 (22736341-22736881) |
|
15-232, gnl|oryCun1|scaffold_193623 (7831-7345) |
|
15-232, gnl|panTro1|chr11 (111873300-111873745) |
|
15-232, gnl|rheMac2|chr15 (99365792-99365334) |
|
15-232, gnl|rn3|chr3 (12043526-12043076) |