Ss1.1-rjej29b_b20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCAGAGGAGAGGAGGAGACCCCCTGTCCTGTCTTTCTCCTGGGAGAGCCGGGAAAGAAGC CTGGAAATAACCCCTGGAAGATGGTGGCCATGAAGACCTTCTGTCTGCTGCTGGTGTCCC TGCTCCTGGCAGTGGCGCTAGGAGAAAAGGAAGAGGGTCACTCCAGATTCCACACTAAGG CCAGTGGCTCCCAGCCTCGTGGCCCCAGGTACGCCGAGGGGACTTTTATCAGTGACTACA GTATTGCCATGGACAAGATCCGCCAACAAGACTTTGTGAACTGGCTGCTAGCACAGAAGG GGAAGAAGAGCGACTGGAAACACAACATCACCCAGAGGGAGGCCCGGGCCCTAGAGCTGG CCCATCAGTCTAACAGGAAGGAGGAGGCGAGGGAGCCGCAGGGCTCCCTCCCCCAGAACC CCGGTGATGATGATGTGCTAAAGGATGTACTGACTCGAGAGCTGCTGGCCTGGATGGTGG AGCAGTTGGAGCTCTGCAGACTCCGGTTTCCGTGACACCGACCAAACCCAGCTCAGGATT GGACTCTGCCCTTCACGTACTGAGCTCCTGCCCCAGCTCCACTCCAGGATACCCCAAAGA AACCAAACTAAGTTTAAACCAAAATAAAATCTTTGTGCCCAAAGTCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCAGAGGAGAGGAGGAGACCCCCTGTCCTGTCTTTCTCCTGGGAGAGCCGGGAAAGAAGC CTGGAAATAACCCCTGGAAGATGGTGGCCATGAAGACCTTCTGTCTGCTGCTGGTGTCCC TGCTCCTGGCAGTGGCGCTAGGAGAAAAGGAAGAGGGTCACTCCAGATTCCACACTAAGG CCAGTGGCTCCCAGCCTCGTGGCCCCAGGTACGCCGAGGGGACTTTTATCAGTGACTACA GTATTGCCATGGACAAGATCCGCCAACAAGACTTTGTGAACTGGCTGCTAGCACAGAAGG GGAAGAAGAGCGACTGGAAACACAACATCACCCAGAGGGAGGCCCGGGCCCTAGAGCTGG CCCATCAGTCTAACAGGAAGGAGGAGGCGAGGGAGCCGCAGGGCTCCCTCCCCCAGAACC CCGGTGATGATGATGTGCTAAAGGATGTACTGACTCGAGAGCTGCTGGCCTGGATGGTGG AGCAGTTGGAGCTCTGCAGACTCCGGTTTCCGTGACACCGACCAAACCCAGCTCAGGATT GGACTCTGCCCTTCACGTACTGAGCTCCTGCCCCAGCTCCACTCCAGGATACCCCAAAGA AACCAAACTAAGTTTAAACCAAAATAAAATCTTTGTGCCCAAAGTCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 164-316, gnl|bosTau2|chr19 (30365877-30366029) | |
| 164-316, gnl|canFam2|chr9 (28497714-28497891) | |
| 164-316, gnl|dasNov1|scaffold_6663 (5153-5331) | |
| 164-316, gnl|echTel1|scaffold_309826 (53142-52956) | |
| 164-316, gnl|galGal2|chr27 (2324772-2324595) | |
| 164-316, gnl|hg17|chr17 (44396666-44396843) | |
| 164-316, gnl|Hg17|chr17 (44396820-44396668) | |
| 164-316, gnl|loxAfr1|scaffold_16537 (8209-8032) | |
| 164-316, gnl|mm7|chr11 (96135816-96135649) | |
| 164-316, gnl|Mm7|chr11 (96135660-96135812) | |
| 164-316, gnl|monDom2|scaffold_18 (45162186-45162008) | |
| 164-316, gnl|oryCun1|scaffold_205042 (72662-72495) | |
| 164-316, gnl|panTro1|chr19_random (43346958-43347135) | |
| 164-316, gnl|rheMac2|chr16 (33195302-33195479) | |
| 164-316, gnl|rn3|chr10 (84750992-84750825) | |
| 507-648, gnl|bosTau2|chr19 (30368588-30368729) | |
| 507-648, gnl|canFam2|chr9 (28494578-28494795) | |
| 507-648, gnl|dasNov1|scaffold_6663 (2163-2383) | |
| 507-648, gnl|echTel1|scaffold_309826 (56049-55815) | |
| 507-648, gnl|hg17|chr17 (44390913-44391121) | |
| 507-648, gnl|Hg17|chr17 (44391076-44390944) | |
| 507-648, gnl|mm7|chr11 (96139922-96139699) | |
| 507-648, gnl|Mm7|chr11 (96139747-96139889) | |
| 507-648, gnl|oryCun1|scaffold_205042 (76321-76098) | |
| 507-648, gnl|panTro1|chr19_random (43341247-43341461) | |
| 507-648, gnl|rheMac2|chr16 (33190088-33190298) | |
| 507-648, gnl|rn3|chr10 (84755223-84754997) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 164-316, gnl|bosTau2|chr19 (30365877-30366029) | |
| 164-316, gnl|canFam2|chr9 (28497714-28497891) | |
| 164-316, gnl|dasNov1|scaffold_6663 (5153-5331) | |
| 164-316, gnl|echTel1|scaffold_309826 (53142-52956) | |
| 164-316, gnl|galGal2|chr27 (2324772-2324595) | |
| 164-316, gnl|hg17|chr17 (44396666-44396843) | |
| 164-316, gnl|Hg17|chr17 (44396820-44396668) | |
| 164-316, gnl|loxAfr1|scaffold_16537 (8209-8032) | |
| 164-316, gnl|mm7|chr11 (96135816-96135649) | |
| 164-316, gnl|Mm7|chr11 (96135660-96135812) | |
| 164-316, gnl|monDom2|scaffold_18 (45162186-45162008) | |
| 164-316, gnl|oryCun1|scaffold_205042 (72662-72495) | |
| 164-316, gnl|panTro1|chr19_random (43346958-43347135) | |
| 164-316, gnl|rheMac2|chr16 (33195302-33195479) | |
| 164-316, gnl|rn3|chr10 (84750992-84750825) | |
| 507-648, gnl|bosTau2|chr19 (30368588-30368729) | |
| 507-648, gnl|canFam2|chr9 (28494578-28494795) | |
| 507-648, gnl|dasNov1|scaffold_6663 (2163-2383) | |
| 507-648, gnl|echTel1|scaffold_309826 (56049-55815) | |
| 507-648, gnl|hg17|chr17 (44390913-44391121) | |
| 507-648, gnl|Hg17|chr17 (44391076-44390944) | |
| 507-648, gnl|mm7|chr11 (96139922-96139699) | |
| 507-648, gnl|Mm7|chr11 (96139747-96139889) | |
| 507-648, gnl|oryCun1|scaffold_205042 (76321-76098) | |
| 507-648, gnl|panTro1|chr19_random (43341247-43341461) | |
| 507-648, gnl|rheMac2|chr16 (33190088-33190298) | |
| 507-648, gnl|rn3|chr10 (84755223-84754997) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| jej (0.791374) | |
| duo (0.518403) | |
| nje (0.33184) | |
| eje (0.197668) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (0.791374) | |
| duo (0.518403) | |
| nje (0.33184) | |
| eje (0.197668) |