Non-Coding RNA Search

Ss1.1-rjej29b_c21.5

Sequence:


               
               GGATGGTTCACTGAGTGTGTAATAAAAGGAGCAAGATAAAAGCATTTGAATTTTCTTTCC
TTGAGAATAATTTTATTTCATGGGAAGGTGATCAAGTTTATACACTACCAAATATAAAGA
TGGTTTTCCATTTTTTAATGAAGGCTACTTAATCTTATGTTCTCTTTTAGTAGTTAGACT
TAAATAACTAAATTTTAGTGTTAAAAAACACTAGTAATGGGATGAATTTATTAATGTAAT
TGTATTCAAGTGGTGATACCTAGTGATTATCCATATGGCATGCTGGTTATGTCACTCATT
CAGCCCTGAGTGCCTCCTATGGGTCAAGTAGTTGCAGGATGAGAGTGAGGAATAGACGAA
GACCGAAACCCTCCAGGGGCTCACTGTTAAATAGTGTACAAGATGCATTGGTAGCATAAT
TAAGTTCTTGTCATTCATCACTTCGACATAACGACAGTGGATGGTTTACTCGACCCAGGT
TGGCCATCTCTGTACCCACTGTGCTATTAGCAGGTTTTACAAATGTATAATGTGAATCCC
ATTTTGAAAATATTCCTGTATATGTTCAGAATCTTATATGTGTATGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGATGGTTCACTGAGTGTGTAATAAAAGGAGCAAGATAAAAGCATTTGAATTTTCTTTCC
TTGAGAATAATTTTATTTCATGGGAAGGTGATCAAGTTTATACACTACCAAATATAAAGA
TGGTTTTCCATTTTTTAATGAAGGCTACTTAATCTTATGTTCTCTTTTAGTAGTTAGACT
TAAATAACTAAATTTTAGTGTTAAAAAACACTAGTAATGGGATGAATTTATTAATGTAAT
TGTATTCAAGTGGTGATACCTAGTGATTATCCATATGGCATGCTGGTTATGTCACTCATT
CAGCCCTGAGTGCCTCCTATGGGTCAAGTAGTTGCAGGATGAGAGTGAGGAATAGACGAA
GACCGAAACCCTCCAGGGGCTCACTGTTAAATAGTGTACAAGATGCATTGGTAGCATAAT
TAAGTTCTTGTCATTCATCACTTCGACATAACGACAGTGGATGGTTTACTCGACCCAGGT
TGGCCATCTCTGTACCCACTGTGCTATTAGCAGGTTTTACAAATGTATAATGTGAATCCC
ATTTTGAAAATATTCCTGTATATGTTCAGAATCTTATATGTGTATGAC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-576, gnl|bosTau2|chr21 (29831625-29832190)
               

               
               1-576, gnl|Hg17|chr14 (34620646-34621551)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-576, gnl|bosTau2|chr21 (29831625-29832190)
               

               
               1-576, gnl|Hg17|chr14 (34620646-34621551)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sto (0.179824)
               

               
               lin (0.145603)
               

               
               jej (0.0989218)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.179824)
               

               
               lin (0.145603)
               

               
               jej (0.0989218)

	1-576, gnl\|bosTau2\|chr21 (29831625-29832190)
	1-576, gnl\|Hg17\|chr14 (34620646-34621551)