Non-Coding RNA Search

Ss1.1-rjej32b_j21.5

Sequence:


               
               CCCACATCTCCCAGTTACTCTCCGACATCCCCCAGCTACTCACCAACTTCCCCAAGTTAC
TCACCCACCAGCCCTAACTATTCTCCAACCAGTCCCAATTACACCCCGACGTCACCCAGC
TATAGCCCGACGTCACCCAGCTACTCACCTACTAGTCCCAACTACACGCCCACAAGCCCC
AACTACAGCCCAACCTCGCCGAGCTACTCCCCCACTTCGCCCAGCTACTCCCCGACCTCG
CCGAGCTACTCCCCTTCGAGCCCACGATACACCCCCCAGTCTCCCACCTATACCCCAAGC
TCCCCCAGCTACAGCCCCAGCTCCCCCAGCTACAGCCCTACCTCGCCCAAGTACACCCCA
ACCAGTCCTTCCTACAGCCCCAGCTCGCCGGAGTACACCCCGACCTCTCCCAAGTACTCG
CCCACCAGCCCCAAATACTCGCCAACCTCTCCCAAGTACTCGCCCACCAGCCCCACCTAC
TCGCCCACCACCCCCAAATACTCGCCAACGTCTCCTACTTACTCACCAACCTCTCCGGTC
TATACCCCAACCTCCCCCAAGTATTCACCCACTAGCCCCACTTACTCGCCCACCTCCCCC
AAGTACTCGCCCACCAGCCCCACCTACTCACCCACGTCCCCCAAAGGCTCCACCTACTCG
CCCACCTCTCCTGGCTACTCGCCCACCAGCCCCACCTATAGCCTCACCAGCCCAGCCATC
AGCCCGGACGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCACATCTCCCAGTTACTCTCCGACATCCCCCAGCTACTCACCAACTTCCCCAAGTTAC
TCACCCACCAGCCCTAACTATTCTCCAACCAGTCCCAATTACACCCCGACGTCACCCAGC
TATAGCCCGACGTCACCCAGCTACTCACCTACTAGTCCCAACTACACGCCCACAAGCCCC
AACTACAGCCCAACCTCGCCGAGCTACTCCCCCACTTCGCCCAGCTACTCCCCGACCTCG
CCGAGCTACTCCCCTTCGAGCCCACGATACACCCCCCAGTCTCCCACCTATACCCCAAGC
TCCCCCAGCTACAGCCCCAGCTCCCCCAGCTACAGCCCTACCTCGCCCAAGTACACCCCA
ACCAGTCCTTCCTACAGCCCCAGCTCGCCGGAGTACACCCCGACCTCTCCCAAGTACTCG
CCCACCAGCCCCAAATACTCGCCAACCTCTCCCAAGTACTCGCCCACCAGCCCCACCTAC
TCGCCCACCACCCCCAAATACTCGCCAACGTCTCCTACTTACTCACCAACCTCTCCGGTC
TATACCCCAACCTCCCCCAAGTATTCACCCACTAGCCCCACTTACTCGCCCACCTCCCCC
AAGTACTCGCCCACCAGCCCCACCTACTCACCCACGTCCCCCAAAGGCTCCACCTACTCG
CCCACCTCTCCTGGCTACTCGCCCACCAGCCCCACCTATAGCCTCACCAGCCCAGCCATC
AGCCCGGACGAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-732, gnl|bosTau2|chr15 (25604846-25604116)
               

               
               1-732, gnl|Hg17|chr17 (7357471-7358202)
               

               
               1-732, gnl|Mm7|chr11 (69816733-69816002)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-732, gnl|bosTau2|chr15 (25604846-25604116)
               

               
               1-732, gnl|Hg17|chr17 (7357471-7358202)
               

               
               1-732, gnl|Mm7|chr11 (69816733-69816002)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               mcp (0.170648)
               

               
               eye (0.170503)
               

               
               hlv (0.139256)
               

               
               cov (0.132153)
               

               
               jej (0.0989218)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)
               

               
               eye (0.170503)
               

               
               hlv (0.139256)
               

               
               cov (0.132153)
               

               
               jej (0.0989218)

	1-732, gnl\|bosTau2\|chr15 (25604846-25604116)
	1-732, gnl\|Hg17\|chr17 (7357471-7358202)
	1-732, gnl\|Mm7\|chr11 (69816733-69816002)

	mcp (0.170648)
	eye (0.170503)
	hlv (0.139256)
	cov (0.132153)
	jej (0.0989218)