Non-Coding RNA Search

Ss1.1-rjej32b_j3.5

Sequence:


               
               AGTCCGCGCCCACTCCCGAGTCGCCGCAGACGCCGCCGTCTCCTCTGCGCNCTCGGTGGC
CCCACACCGGGCCGGGAAGGCCGCGCACACCCCGGAGTCGCCACAAAACAGCAAGGTCCC
AGGCGGCCGCGCTCGGAGCCATTCTCGCCTCGGCCGGGCCATGAAGGTCGAGTTTGCGCC
GCTCAACATCCCGCTGGCGCGGCGGCTGCAGACCGCGGCGGTGCTGCAGTGGGTCCTGTC
TTTCCTGCTGCTCGCGCAGGTGTGCCTTGGAATCATTGTGCTTCTGATCATATACAACTA
CTGGTTCCTCTACTCCTTCCCGGACAGTCCTTGTCCACCCATCCAAGGACGGACTTAGAA
CCGCCAACTATTTTCCCTTGTTAGAGCAGGCAGGTCACTGAGAGCGTTTGTAGCGAACTT
GGGACTCCTCTTCGATTCATTTTTCCACGTGAACCCCGTAGCAAACGACTGTTTGCCAAC
TTTATTTTACTTTGTGCTGTTTTTTAAAATTGAGGTGTACCGTCCCCACAATAAAAGGTA
CAGATTGTAAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTCCGCGCCCACTCCCGAGTCGCCGCAGACGCCGCCGTCTCCTCTGCGCNCTCGGTGGC
CCCACACCGGGCCGGGAAGGCCGCGCACACCCCGGAGTCGCCACAAAACAGCAAGGTCCC
AGGCGGCCGCGCTCGGAGCCATTCTCGCCTCGGCCGGGCCATGAAGGTCGAGTTTGCGCC
GCTCAACATCCCGCTGGCGCGGCGGCTGCAGACCGCGGCGGTGCTGCAGTGGGTCCTGTC
TTTCCTGCTGCTCGCGCAGGTGTGCCTTGGAATCATTGTGCTTCTGATCATATACAACTA
CTGGTTCCTCTACTCCTTCCCGGACAGTCCTTGTCCACCCATCCAAGGACGGACTTAGAA
CCGCCAACTATTTTCCCTTGTTAGAGCAGGCAGGTCACTGAGAGCGTTTGTAGCGAACTT
GGGACTCCTCTTCGATTCATTTTTCCACGTGAACCCCGTAGCAAACGACTGTTTGCCAAC
TTTATTTTACTTTGTGCTGTTTTTTAAAATTGAGGTGTACCGTCCCCACAATAAAAGGTA
CAGATTGTAAGT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-546, gnl|bosTau2|chr14 (2176151-2175598)
               

               
               1-546, gnl|Hg17|chr2 (223361852-223362365)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-546, gnl|bosTau2|chr14 (2176151-2175598)
               

               
               1-546, gnl|Hg17|chr2 (223361852-223362365)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               duo (0.172801)
               

               
               jej (0.0989218)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               duo (0.172801)
               

               
               jej (0.0989218)
               

               
               eje (0.0988338)

	1-546, gnl\|bosTau2\|chr14 (2176151-2175598)
	1-546, gnl\|Hg17\|chr2 (223361852-223362365)