Non-Coding RNA Search

Ss1.1-rjej33b_h24.5

Sequence:


               
               TGTCCCAGCCTTGCTCCAGGTCCGGCCTCCTGAGGGTCCCGGCCCTCCGCCCCACTGCAC
AGGATGCAGGGCGGCTGGGTGCTGCTGCTGCTGGGCCTGCGGCTGCCGCTCTCCCTTGGC
TTCATCCCAGTTGAGGAGGAAGACCCAGCCTTCTGGAACCGCCAGGCAGCCCAGGCCCTG
GATGTTGCCAAGAAGCTGCAACCCATCCAGACGGCGGCCAAGAACCTCATTCTCTTTCTG
GGGGATGGGATGGGGTGCCCACGGTGACGGCCACTCGGATCCTAAAGGGGCAGATGAATG
GCAAGCCGGGACCTGAGACGCCCCTGGCCATGGACCAATTCCCGTACCTGGCTCTGTCCA
AGACATACAACGTGGACAGACAGGTGCCAGACAGCGCAGGCACGGCCACCGCCTACCTCT
GCGGGGTCAAGGCCAACTACCAGACCATCGGTTTAAGCGCGGCCGCCCGCTATAACCAGT
GCAACACGACCCAGGGCAATGAGGTCATCTCCGTGATGAACCGGGCCAAGAAAGCAGGGA
AGTCGGTGGGAGTGGTGACCACCACGAGGGTGCAGCATGCCTCGCCGGCTGGTACCTATG
CACACACGGTGAACAGAAATTGGTACTCCGATGTCAACTTGCCTGCCGAGGCACAGGCAC
AGGGCTGCCAGGACATCGCCACTCAGCTCGTCTACAACATGGACATCGATGTGATCCTGG
GTGGAGGCCGCAAGTACATGTTTCCAGAGGGGACCCCGGACCCTGAATACCCAGACGATG
CCAGTCAGAACGGAGTTCGGAAGGACAAGCGGAACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTCCCAGCCTTGCTCCAGGTCCGGCCTCCTGAGGGTCCCGGCCCTCCGCCCCACTGCAC
AGGATGCAGGGCGGCTGGGTGCTGCTGCTGCTGGGCCTGCGGCTGCCGCTCTCCCTTGGC
TTCATCCCAGTTGAGGAGGAAGACCCAGCCTTCTGGAACCGCCAGGCAGCCCAGGCCCTG
GATGTTGCCAAGAAGCTGCAACCCATCCAGACGGCGGCCAAGAACCTCATTCTCTTTCTG
GGGGATGGGATGGGGTGCCCACGGTGACGGCCACTCGGATCCTAAAGGGGCAGATGAATG
GCAAGCCGGGACCTGAGACGCCCCTGGCCATGGACCAATTCCCGTACCTGGCTCTGTCCA
AGACATACAACGTGGACAGACAGGTGCCAGACAGCGCAGGCACGGCCACCGCCTACCTCT
GCGGGGTCAAGGCCAACTACCAGACCATCGGTTTAAGCGCGGCCGCCCGCTATAACCAGT
GCAACACGACCCAGGGCAATGAGGTCATCTCCGTGATGAACCGGGCCAAGAAAGCAGGGA
AGTCGGTGGGAGTGGTGACCACCACGAGGGTGCAGCATGCCTCGCCGGCTGGTACCTATG
CACACACGGTGAACAGAAATTGGTACTCCGATGTCAACTTGCCTGCCGAGGCACAGGCAC
AGGGCTGCCAGGACATCGCCACTCAGCTCGTCTACAACATGGACATCGATGTGATCCTGG
GTGGAGGCCGCAAGTACATGTTTCCAGAGGGGACCCCGGACCCTGAATACCCAGACGATG
CCAGTCAGAACGGAGTTCGGAAGGACAAGCGGAACC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               357-538, gnl|bosTau2|chr2 (72477956-72478137)
               

               
               357-538, gnl|Hg17|chr2 (233097803-233097984)
               

               
               357-538, gnl|Mm7|chr1 (86969364-86969530)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               357-538, gnl|bosTau2|chr2 (72477956-72478137)
               

               
               357-538, gnl|Hg17|chr2 (233097803-233097984)
               

               
               357-538, gnl|Mm7|chr1 (86969364-86969530)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nco (0.161734)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)
               

               
               jej (0.0989218)

	357-538, gnl\|bosTau2\|chr2 (72477956-72478137)
	357-538, gnl\|Hg17\|chr2 (233097803-233097984)
	357-538, gnl\|Mm7\|chr1 (86969364-86969530)