Non-Coding RNA Search

Ss1.1-rjej36b_a15.5

Sequence:


               
               CGGTGGCTGTCTGGTACTAAAGGACAGACATGGCCCAGTGGGGATGGAGGAAAGCCTCCC
CCCGCCACATACACACCACGGGCCAGGTCTCTGTACCCTTGATGCTGGCAACACAGCAAA
GGATGCAGAGGCCCAGGGAGGGCAGGGGCGCCACAAGCTCAGTCTCTCTCCTCCCCGCCC
CTTAGCGATGACTACCTGTCCCAGGAGGGCCCCCGCTGGACACCAGCCATCAAGCAAGCG
ACGCGCTGGAAGTACACACCCATGGGACGTGATGCGGCTGGCCAGCTCTGGTACACCGGC
CTAACCAACTCGGACTCCCGAGAAGCCTGGTACACGGTCCCAAGGGCCCTGGACAGCCCG
TATCGCGAGGCTTATGCCCGCTGGCATGGATGCTACCGCCACAGGGAGCAGAGCATGCCC
TCAGGTGAGTGCCCAGCCCACACCAGCTCAATTTTGAGGGGAGGGTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGTGGCTGTCTGGTACTAAAGGACAGACATGGCCCAGTGGGGATGGAGGAAAGCCTCCC
CCCGCCACATACACACCACGGGCCAGGTCTCTGTACCCTTGATGCTGGCAACACAGCAAA
GGATGCAGAGGCCCAGGGAGGGCAGGGGCGCCACAAGCTCAGTCTCTCTCCTCCCCGCCC
CTTAGCGATGACTACCTGTCCCAGGAGGGCCCCCGCTGGACACCAGCCATCAAGCAAGCG
ACGCGCTGGAAGTACACACCCATGGGACGTGATGCGGCTGGCCAGCTCTGGTACACCGGC
CTAACCAACTCGGACTCCCGAGAAGCCTGGTACACGGTCCCAAGGGCCCTGGACAGCCCG
TATCGCGAGGCTTATGCCCGCTGGCATGGATGCTACCGCCACAGGGAGCAGAGCATGCCC
TCAGGTGAGTGCCCAGCCCACACCAGCTCAATTTTGAGGGGAGGGTGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|51765760|ref|XP_483925.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|51765760|ref|XP_483925.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               114-444, gnl|bosTau2|chr7 (16316039-16316373)
               

               
               114-444, gnl|Hg17|chr19 (3494169-3494484)
               

               
               114-444, gnl|Mm7|chr10 (81157033-81156722)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               114-444, gnl|bosTau2|chr7 (16316039-16316373)
               

               
               114-444, gnl|Hg17|chr19 (3494169-3494484)
               

               
               114-444, gnl|Mm7|chr10 (81157033-81156722)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pla (0.133672)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               jej (0.0989218)

	114-444, gnl\|bosTau2\|chr7 (16316039-16316373)
	114-444, gnl\|Hg17\|chr19 (3494169-3494484)
	114-444, gnl\|Mm7\|chr10 (81157033-81156722)