Non-Coding RNA Search

Ss1.1-rjej36b_c6.5

Sequence:


               
               AGAAGTTCTACCATGCGGGTCTGGCCTACTGTAACAGCAAGTTAGCCAATGTTCTCTTCA
CCCAGGAACTGGCCCGGAGGCTAAAAGGCTCTGGCGTTACAACATACTCAGTACACCCTG
GCACAGTTGACTCTGAATTGGTTCGGCACTCATCCCTCCTGAGATGGATTTGGTGGCTTT
TCTCCTTCTTCATCAAGACCCCTCAGCAGGGAGCCCAGACCAGCCTGTACTGTGCCTTAA
CAGAAGGTCTTGAGGTTCTAAGTGGAAACCATTTCAGTGACTGCCATGTGGCATGGGTCT
CTGCCCAGGCTCGTAACGAGACAGTAGCAAGGCGGCTATGGGATGTCAGCTGTGACCTGC
TGGGCATCCCTATGGATTGACGGGTGATGGCAGTTGGACCAAGAGAAGCCTGCAGCACAC
TACTCAGTACTCCCTGCCAAAATGATTCTCCTTCAGGATGGCCAAAACCTTGAGCACAAA
GACTGCAAACCTTCCATCCTTGCCTGCTTGATGTTGGATAAAAGCCCAGTGTACACTGCC
AGACTCATCTAAACGCCTTGCATTTGTCTAGATTTATTTTGTTCCTATTACTGCCAGAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAGTTCTACCATGCGGGTCTGGCCTACTGTAACAGCAAGTTAGCCAATGTTCTCTTCA
CCCAGGAACTGGCCCGGAGGCTAAAAGGCTCTGGCGTTACAACATACTCAGTACACCCTG
GCACAGTTGACTCTGAATTGGTTCGGCACTCATCCCTCCTGAGATGGATTTGGTGGCTTT
TCTCCTTCTTCATCAAGACCCCTCAGCAGGGAGCCCAGACCAGCCTGTACTGTGCCTTAA
CAGAAGGTCTTGAGGTTCTAAGTGGAAACCATTTCAGTGACTGCCATGTGGCATGGGTCT
CTGCCCAGGCTCGTAACGAGACAGTAGCAAGGCGGCTATGGGATGTCAGCTGTGACCTGC
TGGGCATCCCTATGGATTGACGGGTGATGGCAGTTGGACCAAGAGAAGCCTGCAGCACAC
TACTCAGTACTCCCTGCCAAAATGATTCTCCTTCAGGATGGCCAAAACCTTGAGCACAAA
GACTGCAAACCTTCCATCCTTGCCTGCTTGATGTTGGATAAAAGCCCAGTGTACACTGCC
AGACTCATCTAAACGCCTTGCATTTGTCTAGATTTATTTTGTTCCTATTACTGCCAGAGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61813784|ref|XP_582373.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61813784|ref|XP_582373.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               269-595, gnl|bosTau2|chr10 (53667482-53667160)
               

               
               269-595, gnl|Hg17|chr14 (67214902-67214578)
               

               
               269-595, gnl|Mm7|chr12 (77134736-77134433)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               269-595, gnl|bosTau2|chr10 (53667482-53667160)
               

               
               269-595, gnl|Hg17|chr14 (67214902-67214578)
               

               
               269-595, gnl|Mm7|chr12 (77134736-77134433)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               jej (0.197844)
               

               
               ill (0.175593)
               

               
               mcp (0.170648)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.197844)
               

               
               ill (0.175593)
               

               
               mcp (0.170648)

	269-595, gnl\|bosTau2\|chr10 (53667482-53667160)
	269-595, gnl\|Hg17\|chr14 (67214902-67214578)
	269-595, gnl\|Mm7\|chr12 (77134736-77134433)