Non-Coding RNA Search

Ss1.1-rjej37b_b9.5

Sequence:


               
               ACTTCATGCTGCGCATCGGCATAACAAAGGAGGGGTTCTGGCGGGGTGTCATCGGAGCCC
GGAAACCGCACTATGACATCTGGGGCAACACAGTCAACGTAGCCAGCAGGATGGAGTCCA
CAGGGGTCATGGGCAACATTCAGGTGGTGGAGGAAACGCAACTCATCCTCCGCGAGTACG
GCTTCCGCTTTGTGAGGAGGGGGCCCATCTTCGTGAAGGGGAAGGGGGAGCTGCTGACCT
TCTTCTTGAAGGGGCGTGACAAGCCGGCGGCCTTCCCCAACGGCGCCTCTGTCACCCTGC
CCCACCAGGTGGTGGACAGCTCCTGAGGGGCCGCCAGCCCCCGAGGGCCCCGAGGGGAGG
GGACAGTGGTGTGTCTGGGGTGGAAGCAAGGCCCTGGGAGAGGAGAGGTGACCGCGTCCC
TGCTTCCCACGCCGCCCCGTGCACACGCCCATGGACGGCAGGTCTGAAAACCTCCTCCGG
CCTTCGTCTGATCCTGGACGTGAGCTCGGGGGCCGCACTTCCTCGGTGCCCGCGGCCTCC
CCCCAGCGCGGGGCTCCCGGGCGGAGCCCCGCGACGAGCCCTCCCTCCCCCAGAGAGGCC
GTGGCCACTGTGAGAAGAACCGAGGGCAGGACAAGGCTGCTGGCGCCGCGCCGGGAGCTC
GGGCGCAAGCTCCGCTTTTCATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTCATGCTGCGCATCGGCATAACAAAGGAGGGGTTCTGGCGGGGTGTCATCGGAGCCC
GGAAACCGCACTATGACATCTGGGGCAACACAGTCAACGTAGCCAGCAGGATGGAGTCCA
CAGGGGTCATGGGCAACATTCAGGTGGTGGAGGAAACGCAACTCATCCTCCGCGAGTACG
GCTTCCGCTTTGTGAGGAGGGGGCCCATCTTCGTGAAGGGGAAGGGGGAGCTGCTGACCT
TCTTCTTGAAGGGGCGTGACAAGCCGGCGGCCTTCCCCAACGGCGCCTCTGTCACCCTGC
CCCACCAGGTGGTGGACAGCTCCTGAGGGGCCGCCAGCCCCCGAGGGCCCCGAGGGGAGG
GGACAGTGGTGTGTCTGGGGTGGAAGCAAGGCCCTGGGAGAGGAGAGGTGACCGCGTCCC
TGCTTCCCACGCCGCCCCGTGCACACGCCCATGGACGGCAGGTCTGAAAACCTCCTCCGG
CCTTCGTCTGATCCTGGACGTGAGCTCGGGGGCCGCACTTCCTCGGTGCCCGCGGCCTCC
CCCCAGCGCGGGGCTCCCGGGCGGAGCCCCGCGACGAGCCCTCCCTCCCCCAGAGAGGCC
GTGGCCACTGTGAGAAGAACCGAGGGCAGGACAAGGCTGCTGGCGCCGCGCCGGGAGCTC
GGGCGCAAGCTCCGCTTTTCATTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61881003|ref|XP_596814.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61881003|ref|XP_596814.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               23-152, gnl|bosTau2|chr10 (12182822-12182950)
               

               
               23-152, gnl|Hg17|chr14 (23857819-23857691)
               

               
               23-152, gnl|Mm7|chr14 (50636845-50636719)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-152, gnl|bosTau2|chr10 (12182822-12182950)
               

               
               23-152, gnl|Hg17|chr14 (23857819-23857691)
               

               
               23-152, gnl|Mm7|chr14 (50636845-50636719)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ese (0.126502)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)
               

               
               jej (0.0989218)

	23-152, gnl\|bosTau2\|chr10 (12182822-12182950)
	23-152, gnl\|Hg17\|chr14 (23857819-23857691)
	23-152, gnl\|Mm7\|chr14 (50636845-50636719)