Ss1.1-rjej38b_f19.5
|
CACGGCGGCGGGCACATGCTCACGTCTGTGGTGTGGGCCATCGGCGAGTACCTGTCCGTG
TCCTGGGACCGCAGGTGCACCGTGGAGCAGATCAACAAGTTTTTCGAAGCCCTGGAGGCC
CTGCTCTTCGAGGTCACGCAGTTGCGGCCTTCGGCCGCCCTCCCCGCGTGTCCCCCCCAG
GTCATCACCGTGCTCATGACCACGCTGACCAAGCTGGCTTCCCGGAGCCAGGACCTGATC
CCCAGGGTCTCTCTGTTCCTGTCGAAGATGCGGACCCTGGCCCAGAGCCCCGCTGCGGGC
TCCGCACACGGCGAGGAAGACGCGCGAGCCGTTCTCACGCGGGCCACTGAGCTGCTGAAC
CTGCTCAAGATGCCCAGCGTGGCCCAGTTTGTGCTCACGCCCAGCGCGGAGGTGTCTGAG
CCCCGCTACCACCGCGACACCAACACGGCCCTGCCCCTGGCCCTGAGCACGGTCAGCCGC
CTGGTGGAGAGGGACGCGGGCCTCCTGCCCGGGTGAAGGGCCGGCGAGCAGGCGGTGCAC
GGGCCGGCTGCAGACCGCGAGCCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CACGGCGGCGGGCACATGCTCACGTCTGTGGTGTGGGCCATCGGCGAGTACCTGTCCGTG
TCCTGGGACCGCAGGTGCACCGTGGAGCAGATCAACAAGTTTTTCGAAGCCCTGGAGGCC
CTGCTCTTCGAGGTCACGCAGTTGCGGCCTTCGGCCGCCCTCCCCGCGTGTCCCCCCCAG
GTCATCACCGTGCTCATGACCACGCTGACCAAGCTGGCTTCCCGGAGCCAGGACCTGATC
CCCAGGGTCTCTCTGTTCCTGTCGAAGATGCGGACCCTGGCCCAGAGCCCCGCTGCGGGC
TCCGCACACGGCGAGGAAGACGCGCGAGCCGTTCTCACGCGGGCCACTGAGCTGCTGAAC
CTGCTCAAGATGCCCAGCGTGGCCCAGTTTGTGCTCACGCCCAGCGCGGAGGTGTCTGAG
CCCCGCTACCACCGCGACACCAACACGGCCCTGCCCCTGGCCCTGAGCACGGTCAGCCGC
CTGGTGGAGAGGGACGCGGGCCTCCTGCCCGGGTGAAGGGCCGGCGAGCAGGCGGTGCAC
GGGCCGGCTGCAGACCGCGAGCCT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
17-246, gnl|bosTau2|chr25 (37456733-37456504) |
|
17-246, gnl|canFam2|chr6 (15858943-15858770) |
|
17-246, gnl|danRer3|chr3 (37023285-37023453) |
|
17-246, gnl|dasNov1|scaffold_118908 (2717-2544) |
|
17-246, gnl|echTel1|scaffold_308072 (4769-4948) |
|
17-246, gnl|fr1|chrUn (72402777-72402943) |
|
17-246, gnl|galGal2|chr14 (6168708-6168916) |
|
17-246, gnl|hg17|chr7 (4603514-4603689) |
|
17-246, gnl|Hg17|chr7 (4603529-4603760) |
|
17-246, gnl|mm7|chr5 (141454567-141454739) |
|
17-246, gnl|Mm7|chr5 (141454581-141454810) |
|
17-246, gnl|monDom2|scaffold_17 (4537323-4537540) |
|
17-246, gnl|oryCun1|scaffold_78279 (395-563) |
|
17-246, gnl|panTro1|chr6 (4978621-4978796) |
|
17-246, gnl|rheMac2|chr3 (42791323-42791497) |
|
17-246, gnl|rn3|chr12 (12522718-12522544) |
|
17-246, gnl|tetNig1|chrUn_random (98427489-98427655) |
|
17-246, gnl|xenTro1|scaffold_1115 (76381-76544) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
17-246, gnl|bosTau2|chr25 (37456733-37456504) |
|
17-246, gnl|canFam2|chr6 (15858943-15858770) |
|
17-246, gnl|danRer3|chr3 (37023285-37023453) |
|
17-246, gnl|dasNov1|scaffold_118908 (2717-2544) |
|
17-246, gnl|echTel1|scaffold_308072 (4769-4948) |
|
17-246, gnl|fr1|chrUn (72402777-72402943) |
|
17-246, gnl|galGal2|chr14 (6168708-6168916) |
|
17-246, gnl|hg17|chr7 (4603514-4603689) |
|
17-246, gnl|Hg17|chr7 (4603529-4603760) |
|
17-246, gnl|mm7|chr5 (141454567-141454739) |
|
17-246, gnl|Mm7|chr5 (141454581-141454810) |
|
17-246, gnl|monDom2|scaffold_17 (4537323-4537540) |
|
17-246, gnl|oryCun1|scaffold_78279 (395-563) |
|
17-246, gnl|panTro1|chr6 (4978621-4978796) |
|
17-246, gnl|rheMac2|chr3 (42791323-42791497) |
|
17-246, gnl|rn3|chr12 (12522718-12522544) |
|
17-246, gnl|tetNig1|chrUn_random (98427489-98427655) |
|
17-246, gnl|xenTro1|scaffold_1115 (76381-76544) |
|
mas (0.210305) |
|
nje (0.16592) |
|
cag (0.151194) |
|
pla (0.133672) |
|
cbr (0.127975) |
|
ecc (0.115035) |
|
jej (0.0989218) |
|
mas (0.210305) |
|
nje (0.16592) |
|
cag (0.151194) |
|
pla (0.133672) |
|
cbr (0.127975) |
|
ecc (0.115035) |
|
jej (0.0989218) |
