Non-Coding RNA Search

Ss1.1-rjej40b_a3.5

Sequence:


               
               GGTTCATTTGCCTGTGACTGAAACCATCTTTCACGGAAACTCCCTGTGTAACAAACAGCA
GAATTAGCATTTGTAGCTTTCAGTCCATTTGAATGGCCAGTGCTCATACTCATGAAAAGA
GAGAAATGGTTTTCTTCTGGGGATGCGGTGAGGAGTAAGAGGTGAATGCCTCCCCACCAG
GAATTTTCTAAGCTGCTAAATATAATTTATTTGCACTAAACTTGTTGCCAATGAAGATTA
ACTATTAGCCTTAAAGTGCTCTAACGAGAAGTGTTCCTTTTAATTGCTTGTGATGGGACT
GATCTTTGTGGGTCCCTGGAATGAGAGAGTGGCTAGTTTAGAAACTGCAATAGAACATCA
GGATTTCAGAATGTAAGTTCTAAGAGGGCTGAGCAGTTAAGTGTCCATGTGCAAATAGTT
AACTTGTTATGGAAATGTGTTTCATGTGCGGTGGTAATGATATTGTATTTTTTTAAGTAT
TTTTATGTTTCTTCAGCTTTTTTCCCCATTAAAATATGAATAGTTCTTTATAATTTATTG
TACTTAATGCTGATTACTGTTAACAATCCGCTTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTCATTTGCCTGTGACTGAAACCATCTTTCACGGAAACTCCCTGTGTAACAAACAGCA
GAATTAGCATTTGTAGCTTTCAGTCCATTTGAATGGCCAGTGCTCATACTCATGAAAAGA
GAGAAATGGTTTTCTTCTGGGGATGCGGTGAGGAGTAAGAGGTGAATGCCTCCCCACCAG
GAATTTTCTAAGCTGCTAAATATAATTTATTTGCACTAAACTTGTTGCCAATGAAGATTA
ACTATTAGCCTTAAAGTGCTCTAACGAGAAGTGTTCCTTTTAATTGCTTGTGATGGGACT
GATCTTTGTGGGTCCCTGGAATGAGAGAGTGGCTAGTTTAGAAACTGCAATAGAACATCA
GGATTTCAGAATGTAAGTTCTAAGAGGGCTGAGCAGTTAAGTGTCCATGTGCAAATAGTT
AACTTGTTATGGAAATGTGTTTCATGTGCGGTGGTAATGATATTGTATTTTTTTAAGTAT
TTTTATGTTTCTTCAGCTTTTTTCCCCATTAAAATATGAATAGTTCTTTATAATTTATTG
TACTTAATGCTGATTACTGTTAACAATCCGCTTTGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-574, gnl|bosTau2|chr6 (48050816-48050238)
               

               
               1-574, gnl|Hg17|chr4 (78173020-78172457)
               

               
               1-574, gnl|Mm7|chr5 (93029008-93028446)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-574, gnl|bosTau2|chr6 (48050816-48050238)
               

               
               1-574, gnl|Hg17|chr4 (78173020-78172457)
               

               
               1-574, gnl|Mm7|chr5 (93029008-93028446)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jej (0.0989218)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.0989218)

	1-574, gnl\|bosTau2\|chr6 (48050816-48050238)
	1-574, gnl\|Hg17\|chr4 (78173020-78172457)
	1-574, gnl\|Mm7\|chr5 (93029008-93028446)