Ss1.1-rjej40b_d13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTCATAGAACTTGCTCAGGATGTCAAGGAAGAAACCAAAGAATGGCTGAAAAGCAGAAT CATCACTAAAAAGAAAGATGGAGGTGCCCAGCTGTTGTTTAGACCATTGTTAAATAAATA TGAGAAGGAAACACTTGAAAATCAGAACTTATATCTTGTTGGTGCCTCGAAGATTAGATT GTTACTGGGAGCCGAAGCAGTGGGATTGGTAAAAGAGTGCAATGATAACACCATGAGGGC CTTCACGTATGGAACCCGACACAACTTCAAAGGTTTTGATGATGATAATGATGATTTCCT TACAATGGCAGAACAGCAATTCATTATCAAACATGAACTTGAAAATCTTAGAGCCAGAGA TGAAAAAATGATCCCTGGTTACCCTCAGGCAAAGTTGTATCCAGGAAAATCATTGTTGAG GAGACTGCTCACCTCTGGCATTGTGATTCAGGTGTTTCCACTGCATGACAATGAAGCCCT GAAGAAGCTGGAGGACACCTGGTATACTCGGTTTACTATAAAGTATCAGCCCATAGACAG TATTCGTGGCTACTTTGGAGAAACAATCGCTCTTTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTCATAGAACTTGCTCAGGATGTCAAGGAAGAAACCAAAGAATGGCTGAAAAGCAGAAT CATCACTAAAAAGAAAGATGGAGGTGCCCAGCTGTTGTTTAGACCATTGTTAAATAAATA TGAGAAGGAAACACTTGAAAATCAGAACTTATATCTTGTTGGTGCCTCGAAGATTAGATT GTTACTGGGAGCCGAAGCAGTGGGATTGGTAAAAGAGTGCAATGATAACACCATGAGGGC CTTCACGTATGGAACCCGACACAACTTCAAAGGTTTTGATGATGATAATGATGATTTCCT TACAATGGCAGAACAGCAATTCATTATCAAACATGAACTTGAAAATCTTAGAGCCAGAGA TGAAAAAATGATCCCTGGTTACCCTCAGGCAAAGTTGTATCCAGGAAAATCATTGTTGAG GAGACTGCTCACCTCTGGCATTGTGATTCAGGTGTTTCCACTGCATGACAATGAAGCCCT GAAGAAGCTGGAGGACACCTGGTATACTCGGTTTACTATAAAGTATCAGCCCATAGACAG TATTCGTGGCTACTTTGGAGAAACAATCGCTCTTTA |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 82-281, gnl|bosTau2|chr22 (13541941-13542140) | |
| 82-281, gnl|canFam2|chr23 (5697148-5696877) | |
| 82-281, gnl|canFam2|chr23 (5697148-5696995) | |
| 82-281, gnl|dasNov1|scaffold_292817 (411-106) | |
| 82-281, gnl|dasNov1|scaffold_292817 (411-258) | |
| 82-281, gnl|echTel1|scaffold_289290 (39425-39700) | |
| 82-281, gnl|echTel1|scaffold_289290 (39425-39578) | |
| 82-281, gnl|galGal2|chr2 (40006052-40005900) | |
| 82-281, gnl|galGal2|chrUn (25358634-25358985) | |
| 82-281, gnl|hg17|chr14 (21237009-21237293) | |
| 82-281, gnl|hg17|chr3 (43616873-43617026) | |
| 82-281, gnl|Hg17|chr3 (43617079-43616880) | |
| 82-281, gnl|loxAfr1|scaffold_5392 (33365-33070) | |
| 82-281, gnl|loxAfr1|scaffold_5392 (33365-33212) | |
| 82-281, gnl|mm7|chr9 (121980147-121980425) | |
| 82-281, gnl|mm7|chr9 (121980147-121980300) | |
| 82-281, gnl|Mm7|chr9 (121980353-121980154) | |
| 82-281, gnl|monDom2|scaffold_7 (89257201-89256941) | |
| 82-281, gnl|monDom2|scaffold_7 (89257201-89257048) | |
| 82-281, gnl|oryCun1|scaffold_86380 (2045-2322) | |
| 82-281, gnl|oryCun1|scaffold_86380 (2045-2200) | |
| 82-281, gnl|panTro1|chr2 (44793861-44794140) | |
| 82-281, gnl|panTro1|chr2 (44793861-44794014) | |
| 82-281, gnl|rheMac2|chr2 (92994786-92994504) | |
| 82-281, gnl|rheMac2|chr2 (92994786-92994633) | |
| 82-281, gnl|rn3|chr8 (122094118-122094396) | |
| 82-281, gnl|rn3|chr8 (122094118-122094271) | |
| 82-281, gnl|tetNig1|chrUn_random (128617152-128616997) | |
| 82-281, gnl|xenTro1|scaffold_319 (604117-604259) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 82-281, gnl|bosTau2|chr22 (13541941-13542140) | |
| 82-281, gnl|canFam2|chr23 (5697148-5696877) | |
| 82-281, gnl|canFam2|chr23 (5697148-5696995) | |
| 82-281, gnl|dasNov1|scaffold_292817 (411-106) | |
| 82-281, gnl|dasNov1|scaffold_292817 (411-258) | |
| 82-281, gnl|echTel1|scaffold_289290 (39425-39700) | |
| 82-281, gnl|echTel1|scaffold_289290 (39425-39578) | |
| 82-281, gnl|galGal2|chr2 (40006052-40005900) | |
| 82-281, gnl|galGal2|chrUn (25358634-25358985) | |
| 82-281, gnl|hg17|chr14 (21237009-21237293) | |
| 82-281, gnl|hg17|chr3 (43616873-43617026) | |
| 82-281, gnl|Hg17|chr3 (43617079-43616880) | |
| 82-281, gnl|loxAfr1|scaffold_5392 (33365-33070) | |
| 82-281, gnl|loxAfr1|scaffold_5392 (33365-33212) | |
| 82-281, gnl|mm7|chr9 (121980147-121980425) | |
| 82-281, gnl|mm7|chr9 (121980147-121980300) | |
| 82-281, gnl|Mm7|chr9 (121980353-121980154) | |
| 82-281, gnl|monDom2|scaffold_7 (89257201-89256941) | |
| 82-281, gnl|monDom2|scaffold_7 (89257201-89257048) | |
| 82-281, gnl|oryCun1|scaffold_86380 (2045-2322) | |
| 82-281, gnl|oryCun1|scaffold_86380 (2045-2200) | |
| 82-281, gnl|panTro1|chr2 (44793861-44794140) | |
| 82-281, gnl|panTro1|chr2 (44793861-44794014) | |
| 82-281, gnl|rheMac2|chr2 (92994786-92994504) | |
| 82-281, gnl|rheMac2|chr2 (92994786-92994633) | |
| 82-281, gnl|rn3|chr8 (122094118-122094396) | |
| 82-281, gnl|rn3|chr8 (122094118-122094271) | |
| 82-281, gnl|tetNig1|chrUn_random (128617152-128616997) | |
| 82-281, gnl|xenTro1|scaffold_319 (604117-604259) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.175593) | |
| jej (0.0989218) |