Non-Coding RNA Search

Ss1.1-rlin01_m22.5

Sequence:


               
               TTCTACATATTGGTTCGTGCCAAGATGGTCCACAGTTGGAATGGGGTCTTGAAAGGATAA
AACTTTCATCCAGTAGCACAAAGAATGAATCCTGTGGCTATGATACCTGCTACAGCTGGG
AAAAATGTTCAGCCACCACCTCCAAGTGCATCTGCCTACTGCCCTTCCAGTGTTTGAAGG
GTGGATACCAACACTACTGCGTCAAAATGGGATCATCAACGACCACAAGAACCATGAACA
TCTGTGAAGTAGGAGCCATAAGATGTGCCCTCAGGAAAATGGAAATACTTTATCCTGGGA
GATGTAGGTCTAACTGAAATCTTGATAAACAGATTTACTGTCCAAAAATAATCCCTACAG
AGATGCTCTTGTATAAACAGCAGACTGCCACATCCAGGAGTTACTAACATAAATTCTTTT
GTGTTAGTTTCATGTAATTATTCTCCCTGCCTCTTGTGTCTTCTCCTCTATCCAATTCTA
GTCCACACCCCTAGGTAATAACTTTCACATCAGTCTAGTAAATTATTCTGTTCATGTGGC
ACTAAAATGATGGCACTTCTAATGACCTTATGAAGTACAAAAACCTTAATTTTCTTCAAT
GAATCAATAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCTACATATTGGTTCGTGCCAAGATGGTCCACAGTTGGAATGGGGTCTTGAAAGGATAA
AACTTTCATCCAGTAGCACAAAGAATGAATCCTGTGGCTATGATACCTGCTACAGCTGGG
AAAAATGTTCAGCCACCACCTCCAAGTGCATCTGCCTACTGCCCTTCCAGTGTTTGAAGG
GTGGATACCAACACTACTGCGTCAAAATGGGATCATCAACGACCACAAGAACCATGAACA
TCTGTGAAGTAGGAGCCATAAGATGTGCCCTCAGGAAAATGGAAATACTTTATCCTGGGA
GATGTAGGTCTAACTGAAATCTTGATAAACAGATTTACTGTCCAAAAATAATCCCTACAG
AGATGCTCTTGTATAAACAGCAGACTGCCACATCCAGGAGTTACTAACATAAATTCTTTT
GTGTTAGTTTCATGTAATTATTCTCCCTGCCTCTTGTGTCTTCTCCTCTATCCAATTCTA
GTCCACACCCCTAGGTAATAACTTTCACATCAGTCTAGTAAATTATTCTGTTCATGTGGC
ACTAAAATGATGGCACTTCTAATGACCTTATGAAGTACAAAAACCTTAATTTTCTTCAAT
GAATCAATAAAC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               130-573, gnl|bosTau2|chr20 (20277671-20277197)
               

               
               130-573, gnl|Hg17|chr5 (41178868-41178387)
               

               
               130-573, gnl|Mm7|chr15 (4642377-4642935)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               130-573, gnl|bosTau2|chr20 (20277671-20277197)
               

               
               130-573, gnl|Hg17|chr5 (41178868-41178387)
               

               
               130-573, gnl|Mm7|chr15 (4642377-4642935)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

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               lin (0.291206)
               

               
               col (0.195008)
               

               
               nco (0.161734)
               

               
               lun (0.150489)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.291206)
               

               
               col (0.195008)
               

               
               nco (0.161734)
               

               
               lun (0.150489)

	130-573, gnl\|bosTau2\|chr20 (20277671-20277197)
	130-573, gnl\|Hg17\|chr5 (41178868-41178387)
	130-573, gnl\|Mm7\|chr15 (4642377-4642935)