Non-Coding RNA Search

Ss1.1-rlin03_j17.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTTTTGTTTTTCTCAGACTTTATTGTCCACAATAGCATTTATAA
CATGAAGAGATTTGATTCTTCTCTTCAGCCCTGCTACTAACTATGTGTACAAGTGACCCG
ATTCATAAAACGAGGGGAAACGCCAAGAAGGAAAAAAAAGTATGACACCTACACTGAGAC
CAATGTTTTGTCATTTAATTGTCTTCTCATAATTGTTAGTTTCGATATTTACCAAAGTTC
CCTAAAACCAGAGTCACTTTGCAGGACAAGGATTCCCCACTTTTACCACTTGTATTCAAC
ACAGTTTTGGAAGTCCTAGCCAGAGCAATTGGGCAAGATAAAGAAAGAAAAGGCATCCGA
GTCAGAAAGGAAGAAGTAAATTCATCCCTGTTCACAGATGATATGACCTTATATGTAGAA
ATGGTAAATATGCCACAAAAATTCTTACAACTACTAAATGAATTCACCAAAGTAGCAGGA
TATAAAACCAATACACAAAAATGAGTTGCATATACGGAAACTAACAGTGACCAATCTGAA
AAGGAAATTAAGAAAATAATTCCATTTATAATAACATCAAAAGAATAAAATACTTGCTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTTTTGTTTTTCTCAGACTTTATTGTCCACAATAGCATTTATAA
CATGAAGAGATTTGATTCTTCTCTTCAGCCCTGCTACTAACTATGTGTACAAGTGACCCG
ATTCATAAAACGAGGGGAAACGCCAAGAAGGAAAAAAAAGTATGACACCTACACTGAGAC
CAATGTTTTGTCATTTAATTGTCTTCTCATAATTGTTAGTTTCGATATTTACCAAAGTTC
CCTAAAACCAGAGTCACTTTGCAGGACAAGGATTCCCCACTTTTACCACTTGTATTCAAC
ACAGTTTTGGAAGTCCTAGCCAGAGCAATTGGGCAAGATAAAGAAAGAAAAGGCATCCGA
GTCAGAAAGGAAGAAGTAAATTCATCCCTGTTCACAGATGATATGACCTTATATGTAGAA
ATGGTAAATATGCCACAAAAATTCTTACAACTACTAAATGAATTCACCAAAGTAGCAGGA
TATAAAACCAATACACAAAAATGAGTTGCATATACGGAAACTAACAGTGACCAATCTGAA
AAGGAAATTAAGAAAATAATTCCATTTATAATAACATCAAAAGAATAAAATACTTGCTAA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               18-582, gnl|bosTau2|chr1 (93427213-93426649)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-582, gnl|bosTau2|chr1 (93427213-93426649)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               cag (0.151194)
               

               
               lin (0.145603)
               

               
               jca (0.11396)
               

               
               spc (0.113366)
               

               
               cty (0.10408)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cag (0.151194)
               

               
               lin (0.145603)
               

               
               jca (0.11396)
               

               
               spc (0.113366)
               

               
               cty (0.10408)

	cag (0.151194)
	lin (0.145603)
	jca (0.11396)
	spc (0.113366)
	cty (0.10408)