Ss1.1-rlin07_i15.5
|
CTGCCTTCATCGCATCATTTTTGGGGGTGGCTGAGATGGTAAGTTTTTCCAGCCCTTCAC
ATTAAGTAATAATTTTGCTGAACAGGTCTTAAAATTCTTACTAATACTGTTAAAAAAAAA
GGTTGAAGAAATGTGCCATGCTTATTAGAGAGGGGATGCATTCTCCCTTATACAGGGACA
TGGGTATATATGTCACATATGCCAGTCTGCAACCACCATTCATGCCAGGACCGGAAAGCC
TGCTGCAGATGAACGGTTATCCTACTATCACAGTCATTTGTGTTGGTCTCGCAGCCAGCA
TCACTTTAGGCAGTAGCTAGTTATTACCCCTGACACGATGGACAGTGTCTGTCAGTGTAA
GTTTAAGATAAAATATTCTGGGTTGATTAAGCAAGCTAGGTGTTTTAATTTCCTTTGACA
TTTTCAAAACAACTGACAGAATTGTTGAGACCTTTGAAATCTTAAGGGAAATTCATTTCA
TCTTCTAGGTATGATGGCTTCTTTTGAAAGCAGTGACTGGGGACATCAATCTGTAATCAC
TTTTTCCATTCATTCATGCAATATTTGGTATGTGTCTGGCGCTGGGAATAATGCAAACAA
AAATAATTCATATAATCTCCATTCACCAGGAGCTCACATGAGCAAAACAGAGTTATATTG
CTAAATGCAATCCGATCTGTTTTTCCAAACTTATTCATTTTTAATAAAAGAAAAACTAAG
TATAAATAACATCTGAAACTTGAACTTATTCATTCGCTGCTACTTTTCTGGCGGGAACAA
TAGCAAGCATTAGCGTATGGTTCTTTGGGTTGGATCAGACTGCCCTCTGCAGACTTGGTT
ATTAACTAAAAACCACCTTAATTTGGGGATCAGGAGGTGATGGCATGGGAACCTGCCCCA
GTGACTGCAGTTTCCTTTCTTTAGAGAATTCGATCTAGAAGAGGTGATATCCCATTAGCA
TGCTAACAAGATCAACACAGCAGATTAAATGAGATAGGGTGGGGTGAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTGCCTTCATCGCATCATTTTTGGGGGTGGCTGAGATGGTAAGTTTTTCCAGCCCTTCAC
ATTAAGTAATAATTTTGCTGAACAGGTCTTAAAATTCTTACTAATACTGTTAAAAAAAAA
GGTTGAAGAAATGTGCCATGCTTATTAGAGAGGGGATGCATTCTCCCTTATACAGGGACA
TGGGTATATATGTCACATATGCCAGTCTGCAACCACCATTCATGCCAGGACCGGAAAGCC
TGCTGCAGATGAACGGTTATCCTACTATCACAGTCATTTGTGTTGGTCTCGCAGCCAGCA
TCACTTTAGGCAGTAGCTAGTTATTACCCCTGACACGATGGACAGTGTCTGTCAGTGTAA
GTTTAAGATAAAATATTCTGGGTTGATTAAGCAAGCTAGGTGTTTTAATTTCCTTTGACA
TTTTCAAAACAACTGACAGAATTGTTGAGACCTTTGAAATCTTAAGGGAAATTCATTTCA
TCTTCTAGGTATGATGGCTTCTTTTGAAAGCAGTGACTGGGGACATCAATCTGTAATCAC
TTTTTCCATTCATTCATGCAATATTTGGTATGTGTCTGGCGCTGGGAATAATGCAAACAA
AAATAATTCATATAATCTCCATTCACCAGGAGCTCACATGAGCAAAACAGAGTTATATTG
CTAAATGCAATCCGATCTGTTTTTCCAAACTTATTCATTTTTAATAAAAGAAAAACTAAG
TATAAATAACATCTGAAACTTGAACTTATTCATTCGCTGCTACTTTTCTGGCGGGAACAA
TAGCAAGCATTAGCGTATGGTTCTTTGGGTTGGATCAGACTGCCCTCTGCAGACTTGGTT
ATTAACTAAAAACCACCTTAATTTGGGGATCAGGAGGTGATGGCATGGGAACCTGCCCCA
GTGACTGCAGTTTCCTTTCTTTAGAGAATTCGATCTAGAAGAGGTGATATCCCATTAGCA
TGCTAACAAGATCAACACAGCAGATTAAATGAGATAGGGTGGGGTGAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
23-325, gnl|bosTau2|chr26 (11604613-11604911) |
|
23-325, gnl|canFam2|chr28 (15603241-15603733) |
|
23-325, gnl|dasNov1|scaffold_42953 (8441-8949) |
|
23-325, gnl|echTel1|scaffold_196339 (15601-15146) |
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23-325, gnl|hg17|chr10 (101460006-101460520) |
|
23-325, gnl|Hg17|chr10 (101460241-101460519) |
|
23-325, gnl|mm7|chr19 (43628203-43628682) |
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23-325, gnl|Mm7|chr19 (43628424-43628706) |
|
23-325, gnl|oryCun1|scaffold_199377 (37455-36976) |
|
23-325, gnl|panTro1|chr8 (103210661-103211174) |
|
23-325, gnl|rheMac2|chr9 (99331332-99331861) |
|
23-325, gnl|rn3|chr1 (247209017-247208540) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
23-325, gnl|bosTau2|chr26 (11604613-11604911) |
|
23-325, gnl|canFam2|chr28 (15603241-15603733) |
|
23-325, gnl|dasNov1|scaffold_42953 (8441-8949) |
|
23-325, gnl|echTel1|scaffold_196339 (15601-15146) |
|
23-325, gnl|hg17|chr10 (101460006-101460520) |
|
23-325, gnl|Hg17|chr10 (101460241-101460519) |
|
23-325, gnl|mm7|chr19 (43628203-43628682) |
|
23-325, gnl|Mm7|chr19 (43628424-43628706) |
|
23-325, gnl|oryCun1|scaffold_199377 (37455-36976) |
|
23-325, gnl|panTro1|chr8 (103210661-103211174) |
|
23-325, gnl|rheMac2|chr9 (99331332-99331861) |
|
23-325, gnl|rn3|chr1 (247209017-247208540) |
|
duo (0.172801) |
|
lin (0.145603) |
|
lnt (0.142308) |
|
thg (0.126791) |
|
duo (0.172801) |
|
lin (0.145603) |
|
lnt (0.142308) |
|
thg (0.126791) |
