Non-Coding RNA Search

Ss1.1-rlin08_c5.5

Sequence:


               
               ACTGGAATTCTGTCAGCAAATATGCCAACAAAAGAGTTAAAAGTATTATGTCAAGGCAAG
CATTTAATTGAGTCCAATGTTTCTTCTTGAGCCTCTGTGTATAACGAAATGCAGTCAGAC
TCTGAAACACCTGCATGGCTTTTTCTGGTTCTGGTTAATGTATTGAAAAATCAGGCACAG
TCATACCTCTAAGCATAGATGAAATGTGCAATTAATGATGAGACAAGCAGTAAAGCTCCC
TGGTATGTACCAATTATTTGTTTGCAGATGGGAATGTTAACATTTGTAGCAGCAATCGAA
TGGCTTCCATTTGAATACCACCAAACATATGCACTTTCTCTTAGCAAGACTGCATGACGA
ATAATATCTTTGCCAGGTTTTCCTCAAAGTGGCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGGAATTCTGTCAGCAAATATGCCAACAAAAGAGTTAAAAGTATTATGTCAAGGCAAG
CATTTAATTGAGTCCAATGTTTCTTCTTGAGCCTCTGTGTATAACGAAATGCAGTCAGAC
TCTGAAACACCTGCATGGCTTTTTCTGGTTCTGGTTAATGTATTGAAAAATCAGGCACAG
TCATACCTCTAAGCATAGATGAAATGTGCAATTAATGATGAGACAAGCAGTAAAGCTCCC
TGGTATGTACCAATTATTTGTTTGCAGATGGGAATGTTAACATTTGTAGCAGCAATCGAA
TGGCTTCCATTTGAATACCACCAAACATATGCACTTTCTCTTAGCAAGACTGCATGACGA
ATAATATCTTTGCCAGGTTTTCCTCAAAGTGGCTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-396, gnl|bosTau2|chr3 (30069376-30069761)
               

               
               5-396, gnl|Hg17|chr1 (110936784-110937226)
               

               
               5-396, gnl|Mm7|chr3 (106849048-106848654)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-396, gnl|bosTau2|chr3 (30069376-30069761)
               

               
               5-396, gnl|Hg17|chr1 (110936784-110937226)
               

               
               5-396, gnl|Mm7|chr3 (106849048-106848654)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lin (0.145603)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)
               

               
               spl (0.143184)

	5-396, gnl\|bosTau2\|chr3 (30069376-30069761)
	5-396, gnl\|Hg17\|chr1 (110936784-110937226)
	5-396, gnl\|Mm7\|chr3 (106849048-106848654)