Ss1.1-rlin09_f4.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACAGCACTGGTTGGGTTGACCAGTAGGTACAAAAAGGCTATGCGATATGAATTTCAGAAA TGGACTGAAGAAGGAGAGCTATGTAATAGATACACTACATTGGAAGAACTGACTTCTGAA ATGAAGGGAAAAAAAAAACCCACCCTGTCGTCCTCTTCCCCAAACCCCACCACCTCCCCT TTCCCCTTTTACCTGATCTCATAGATTAGCCATCTGTCACATTCACTTTTATTTCAATCC TTATGTTTCATATACTTCTGTCTCGATGCTGTTAACACCTTATATTTGGAGTGATGAGCA GAAATTTCTCCAAAACCACTGAATAACATGGAAAATTCAAGGATTGTTTAAAGGTCTGAT GATTACAAACGAATTCTGGTTAAGTCATTTCTGTGATTCTATCATGTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACAGCACTGGTTGGGTTGACCAGTAGGTACAAAAAGGCTATGCGATATGAATTTCAGAAA TGGACTGAAGAAGGAGAGCTATGTAATAGATACACTACATTGGAAGAACTGACTTCTGAA ATGAAGGGAAAAAAAAAACCCACCCTGTCGTCCTCTTCCCCAAACCCCACCACCTCCCCT TTCCCCTTTTACCTGATCTCATAGATTAGCCATCTGTCACATTCACTTTTATTTCAATCC TTATGTTTCATATACTTCTGTCTCGATGCTGTTAACACCTTATATTTGGAGTGATGAGCA GAAATTTCTCCAAAACCACTGAATAACATGGAAAATTCAAGGATTGTTTAAAGGTCTGAT GATTACAAACGAATTCTGGTTAAGTCATTTCTGTGATTCTATCATGTA |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 1-107, + strand, RNAz p=0.841962 | |
| 227-346, - strand, RNAz p=0.917602 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-107, + strand, RNAz p=0.841962 | |
| 227-346, - strand, RNAz p=0.917602 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of AB061371, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-408, gnl|bosTau2|chr25 (11784194-11784606) | |
| 1-408, gnl|Hg17|chr16 (18727901-18727521) | |
| 1-408, gnl|Mm7|chr7 (114057636-114057221) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-408, gnl|bosTau2|chr25 (11784194-11784606) | |
| 1-408, gnl|Hg17|chr16 (18727901-18727521) | |
| 1-408, gnl|Mm7|chr7 (114057636-114057221) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lin (0.145603) | |
| thg (0.126791) |