Non-Coding RNA Search

Ss1.1-rlin12_o11.5

Sequence:


               
               AAAGGTTTGGGGCTGCAGAGAAACAAACTGTAAGTTCGATCGACAAACTTTTTTTAAAAA
TCTGTAATATCGATTCGGAATGGGAAGGGGGTGTTGTAAATACCAACTTACTACCACTGT
CCAAGTTTGAGCCCGTTTTCAAAATGGGGAAAGGCGCATTTCTTATTAATACCTTAACAA
CGATAATAATGATGCTGTTTCTTTCCTTACCTTGGTGTTGAACTGCAGAATCCTACTCCC
GATCAATGCCCAGGAACTTAGAAGAATTGGTGATATTAGGACTTCAGTACTTCTGGAAAA
AAAAAATGCAAATGGTTTAGCCAGGATCTTTCCTGTCTGATTCGTCACTATTATTATATC
TGGTGATGCGAATGGTTGGAGCGATTCAATCTTAAGTCATTAATGAGCTATTTTATAAAC
ACAACTGTCTGAAGATCTTCATTTACATTTTTCGAAGGATCATTTCGCTAACCTCACACA
GGCTTATGTCAACAGCATGATTACTGGACTTCAGTTACACTCTTACAAACAACATAGCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGGTTTGGGGCTGCAGAGAAACAAACTGTAAGTTCGATCGACAAACTTTTTTTAAAAA
TCTGTAATATCGATTCGGAATGGGAAGGGGGTGTTGTAAATACCAACTTACTACCACTGT
CCAAGTTTGAGCCCGTTTTCAAAATGGGGAAAGGCGCATTTCTTATTAATACCTTAACAA
CGATAATAATGATGCTGTTTCTTTCCTTACCTTGGTGTTGAACTGCAGAATCCTACTCCC
GATCAATGCCCAGGAACTTAGAAGAATTGGTGATATTAGGACTTCAGTACTTCTGGAAAA
AAAAAATGCAAATGGTTTAGCCAGGATCTTTCCTGTCTGATTCGTCACTATTATTATATC
TGGTGATGCGAATGGTTGGAGCGATTCAATCTTAAGTCATTAATGAGCTATTTTATAAAC
ACAACTGTCTGAAGATCTTCATTTACATTTTTCGAAGGATCATTTCGCTAACCTCACACA
GGCTTATGTCAACAGCATGATTACTGGACTTCAGTTACACTCTTACAAACAACATAGCCG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               3-538, gnl|bosTau2|chr2 (51747422-51747942)
               

               
               3-538, gnl|Hg17|chr2 (200150478-200151003)
               

               
               3-538, gnl|Mm7|chr1 (57223159-57223730)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-538, gnl|bosTau2|chr2 (51747422-51747942)
               

               
               3-538, gnl|Hg17|chr2 (200150478-200151003)
               

               
               3-538, gnl|Mm7|chr1 (57223159-57223730)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               hea (0.204499)
               

               
               lin (0.145603)
               

               
               ecc (0.115035)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               lin (0.145603)
               

               
               ecc (0.115035)

	3-538, gnl\|bosTau2\|chr2 (51747422-51747942)
	3-538, gnl\|Hg17\|chr2 (200150478-200151003)
	3-538, gnl\|Mm7\|chr1 (57223159-57223730)