Ss1.1-rlin13_o24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTGAAACATCTTGAAGATAAATATGCAGAAGTTGAACAGCTTATATCAAAAAAATATGT ACCAGCTCAGAGGAAGGCAGATTTAGAGGAGGAGATGATTGTGGTATTAGAACGTCGAGA TTTAGCTGAAAATCTGAACAAAGAATTACAGTTTCGATGAACAAGGCATCGTTGAGGAAA TCCTTGAAGATGATCCTGGCAAGGCAAAAGAAGCTGAACTTTTGCTTTACTATGTTGAAA GGTTCAATGAATTAATCTCACTTGGGGAATATGAAAAGGCAGTTTATTTTGCAGTGAACA GTCCTAGAAGAATTCTTCAAAATATTGGAACAATGAATAAATTTAAGGCTGTTGGAAAAG TTAGGGGAAAGCCTTTCCCATTGCTCTTATTTTTTGAAGCTATCTTTAGCATAAGTCATG CTTTTAGACATCCTGTTGATGCAGAACTAACTCTGGAAGGAATCAAATGTGGATTATCTG AGAAACGTTTAGATTTAGTTATCAATTGGGTCACCCAAGAAAGGCTGACATTTTCTGAGG AGGCTGGAGATGTGATTTTTGATTATGGGGAGCAGGATACTTATAACAAGTCCAAATGCC TGGCTTTAGCTCAGATTATCTATAGTGAATGTGGCCTGCATAAGAAAGCACTTCTTTGCC TGTGTAAACAGGGTCAAATTCATGGGGCTATGGAATATATACAACAATTCAAGGACTTTA CTTCGGATGACCTGATGCAGCTAATAAAGTTATGTCCCCACATTGAATTAATCCAGTGTC TCACTAAAGAATGGAATGGGAAACCACCATCTTTATCTTTTGGTCTTGCTCTACTTTACC TGTTTTCTGTAGATATGAAAAAAGTTGGCATTAAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTGAAACATCTTGAAGATAAATATGCAGAAGTTGAACAGCTTATATCAAAAAAATATGT ACCAGCTCAGAGGAAGGCAGATTTAGAGGAGGAGATGATTGTGGTATTAGAACGTCGAGA TTTAGCTGAAAATCTGAACAAAGAATTACAGTTTCGATGAACAAGGCATCGTTGAGGAAA TCCTTGAAGATGATCCTGGCAAGGCAAAAGAAGCTGAACTTTTGCTTTACTATGTTGAAA GGTTCAATGAATTAATCTCACTTGGGGAATATGAAAAGGCAGTTTATTTTGCAGTGAACA GTCCTAGAAGAATTCTTCAAAATATTGGAACAATGAATAAATTTAAGGCTGTTGGAAAAG TTAGGGGAAAGCCTTTCCCATTGCTCTTATTTTTTGAAGCTATCTTTAGCATAAGTCATG CTTTTAGACATCCTGTTGATGCAGAACTAACTCTGGAAGGAATCAAATGTGGATTATCTG AGAAACGTTTAGATTTAGTTATCAATTGGGTCACCCAAGAAAGGCTGACATTTTCTGAGG AGGCTGGAGATGTGATTTTTGATTATGGGGAGCAGGATACTTATAACAAGTCCAAATGCC TGGCTTTAGCTCAGATTATCTATAGTGAATGTGGCCTGCATAAGAAAGCACTTCTTTGCC TGTGTAAACAGGGTCAAATTCATGGGGCTATGGAATATATACAACAATTCAAGGACTTTA CTTCGGATGACCTGATGCAGCTAATAAAGTTATGTCCCCACATTGAATTAATCCAGTGTC TCACTAAAGAATGGAATGGGAAACCACCATCTTTATCTTTTGGTCTTGCTCTACTTTACC TGTTTTCTGTAGATATGAAAAAAGTTGGCATTAAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-170, gnl|bosTau2|chr11 (21966241-21966070) | |
| 1-170, gnl|canFam2|chr10 (59267044-59267383) | |
| 1-170, gnl|echTel1|scaffold_321363 (39091-39414) | |
| 1-170, gnl|hg17|chr2 (55348370-55348709) | |
| 1-170, gnl|Hg17|chr2 (55348572-55348401) | |
| 1-170, gnl|mm7|chr11 (29512684-29512404) | |
| 1-170, gnl|Mm7|chr11 (29512502-29512669) | |
| 1-170, gnl|monDom2|scaffold_1 (18124268-18124608) | |
| 1-170, gnl|oryCun1|scaffold_137725 (20023-19675) | |
| 1-170, gnl|panTro1|chr12 (57478676-57479015) | |
| 1-170, gnl|rheMac2|chr13 (55532181-55532520) | |
| 1-170, gnl|rn3|chr14 (110603919-110603623) | |
| 240-348, gnl|bosTau2|chr11 (21963252-21963144) | |
| 240-348, gnl|canFam2|chr10 (59264269-59264478) | |
| 240-348, gnl|dasNov1|scaffold_96552 (8105-7851) | |
| 240-348, gnl|echTel1|scaffold_170971 (2593-2380) | |
| 240-348, gnl|hg17|chr2 (55345046-55345293) | |
| 240-348, gnl|Hg17|chr2 (55345165-55345057) | |
| 240-348, gnl|mm7|chr11 (29515975-29515757) | |
| 240-348, gnl|Mm7|chr11 (29515854-29515962) | |
| 240-348, gnl|monDom2|scaffold_1 (18122699-18122938) | |
| 240-348, gnl|oryCun1|scaffold_156759 (2802-2568) | |
| 240-348, gnl|panTro1|chr12 (57475348-57475595) | |
| 240-348, gnl|rn3|chr14 (110607230-110607011) | |
| 522-730, gnl|bosTau2|chr11 (28084241-28084033) | |
| 522-730, gnl|canFam2|chr10 (59255751-59256159) | |
| 522-730, gnl|dasNov1|scaffold_68574 (3556-3977) | |
| 522-730, gnl|echTel1|scaffold_285602 (99550-100094) | |
| 522-730, gnl|hg17|chr2 (55319223-55319662) | |
| 522-730, gnl|Hg17|chr2 (55319501-55319293) | |
| 522-730, gnl|loxAfr1|scaffold_22381 (9054-8607) | |
| 522-730, gnl|mm7|chr11 (29523921-29523510) | |
| 522-730, gnl|Mm7|chr11 (29523654-29523862) | |
| 522-730, gnl|monDom2|scaffold_1 (18102671-18103114) | |
| 522-730, gnl|oryCun1|scaffold_194886 (48194-48562) | |
| 522-730, gnl|panTro1|chr12 (57449549-57449988) | |
| 522-730, gnl|rheMac2|chr13 (55494032-55494466) | |
| 522-730, gnl|rn3|chr14 (110615644-110615263) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-170, gnl|bosTau2|chr11 (21966241-21966070) | |
| 1-170, gnl|canFam2|chr10 (59267044-59267383) | |
| 1-170, gnl|echTel1|scaffold_321363 (39091-39414) | |
| 1-170, gnl|hg17|chr2 (55348370-55348709) | |
| 1-170, gnl|Hg17|chr2 (55348572-55348401) | |
| 1-170, gnl|mm7|chr11 (29512684-29512404) | |
| 1-170, gnl|Mm7|chr11 (29512502-29512669) | |
| 1-170, gnl|monDom2|scaffold_1 (18124268-18124608) | |
| 1-170, gnl|oryCun1|scaffold_137725 (20023-19675) | |
| 1-170, gnl|panTro1|chr12 (57478676-57479015) | |
| 1-170, gnl|rheMac2|chr13 (55532181-55532520) | |
| 1-170, gnl|rn3|chr14 (110603919-110603623) | |
| 240-348, gnl|bosTau2|chr11 (21963252-21963144) | |
| 240-348, gnl|canFam2|chr10 (59264269-59264478) | |
| 240-348, gnl|dasNov1|scaffold_96552 (8105-7851) | |
| 240-348, gnl|echTel1|scaffold_170971 (2593-2380) | |
| 240-348, gnl|hg17|chr2 (55345046-55345293) | |
| 240-348, gnl|Hg17|chr2 (55345165-55345057) | |
| 240-348, gnl|mm7|chr11 (29515975-29515757) | |
| 240-348, gnl|Mm7|chr11 (29515854-29515962) | |
| 240-348, gnl|monDom2|scaffold_1 (18122699-18122938) | |
| 240-348, gnl|oryCun1|scaffold_156759 (2802-2568) | |
| 240-348, gnl|panTro1|chr12 (57475348-57475595) | |
| 240-348, gnl|rn3|chr14 (110607230-110607011) | |
| 522-730, gnl|bosTau2|chr11 (28084241-28084033) | |
| 522-730, gnl|canFam2|chr10 (59255751-59256159) | |
| 522-730, gnl|dasNov1|scaffold_68574 (3556-3977) | |
| 522-730, gnl|echTel1|scaffold_285602 (99550-100094) | |
| 522-730, gnl|hg17|chr2 (55319223-55319662) | |
| 522-730, gnl|Hg17|chr2 (55319501-55319293) | |
| 522-730, gnl|loxAfr1|scaffold_22381 (9054-8607) | |
| 522-730, gnl|mm7|chr11 (29523921-29523510) | |
| 522-730, gnl|Mm7|chr11 (29523654-29523862) | |
| 522-730, gnl|monDom2|scaffold_1 (18102671-18103114) | |
| 522-730, gnl|oryCun1|scaffold_194886 (48194-48562) | |
| 522-730, gnl|panTro1|chr12 (57449549-57449988) | |
| 522-730, gnl|rheMac2|chr13 (55494032-55494466) | |
| 522-730, gnl|rn3|chr14 (110615644-110615263) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| liv (0.146284) | |
| lin (0.145603) | |
| cty (0.10408) |