Non-Coding RNA Search

Ss1.1-rlin14_k2.5

Sequence:


               
               AAAAAACAAAAACAAAAACAAAGTTTTTACATGGAAACAGCAATGGAATAAATGTTTTCC
TATAGCGGAGAGCTTTACCCCTAGACTATTAAAAACAAATTTCAAAAAATGCTTTTGGGC
CCAGGCTGTTGGTGAGTTAGAGTCATGGGAACAGTTTACAAGCGAAGTGTTTTCCTGCAG
AACATATGCTGGCACTCGGTCGTCATTTTGGTTTTTTTGTTAATGAAGAAAAGAGAGGGT
GGATGCCTAAGAGTGACTCTCAGCCTGGTGGTTTGTGGTCCAGTCACGATGTCTAAACGG
CTACAGAAGCACATCTAGCTGGTATGATTGCCATGACCTTTAACTTTACTTTGCAATTAC
TTTGACATCAATTAATGAGCTCTCCTTTCATGAGTTTAAATTTATTGCATATTCTGAAGT
GCTGGGATCAAGTTCAAGATCCTTAACGCGTTGATTAGGCAATTGCTGGGCCGTGAGGGT
GGATGATTTGGCTCTAACAGCTGGAGATGAAGTCTTCCTCTCATACCACACGCAAAGGAG
GATTTGGAGCTTTTAAGCCTTGCTTTGAAATGTGGAGCGTTCTTGCAGGACTGAGCAGTA
CACAGAATATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAACAAAAACAAAAACAAAGTTTTTACATGGAAACAGCAATGGAATAAATGTTTTCC
TATAGCGGAGAGCTTTACCCCTAGACTATTAAAAACAAATTTCAAAAAATGCTTTTGGGC
CCAGGCTGTTGGTGAGTTAGAGTCATGGGAACAGTTTACAAGCGAAGTGTTTTCCTGCAG
AACATATGCTGGCACTCGGTCGTCATTTTGGTTTTTTTGTTAATGAAGAAAAGAGAGGGT
GGATGCCTAAGAGTGACTCTCAGCCTGGTGGTTTGTGGTCCAGTCACGATGTCTAAACGG
CTACAGAAGCACATCTAGCTGGTATGATTGCCATGACCTTTAACTTTACTTTGCAATTAC
TTTGACATCAATTAATGAGCTCTCCTTTCATGAGTTTAAATTTATTGCATATTCTGAAGT
GCTGGGATCAAGTTCAAGATCCTTAACGCGTTGATTAGGCAATTGCTGGGCCGTGAGGGT
GGATGATTTGGCTCTAACAGCTGGAGATGAAGTCTTCCTCTCATACCACACGCAAAGGAG
GATTTGGAGCTTTTAAGCCTTGCTTTGAAATGTGGAGCGTTCTTGCAGGACTGAGCAGTA
CACAGAATATAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               64-609, gnl|bosTau2|chr1 (96818327-96817768)
               

               
               64-609, gnl|Hg17|chr21 (37048080-37047474)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               64-609, gnl|bosTau2|chr1 (96818327-96817768)
               

               
               64-609, gnl|Hg17|chr21 (37048080-37047474)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               mcp (0.170648)
               

               
               nco (0.161734)
               

               
               lin (0.145603)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)
               

               
               nco (0.161734)
               

               
               lin (0.145603)

	64-609, gnl\|bosTau2\|chr1 (96818327-96817768)
	64-609, gnl\|Hg17\|chr21 (37048080-37047474)