Non-Coding RNA Search

Ss1.1-rlin15_i23.5

Sequence:


               
               AACTCTGCAGCCATCTGAACTGGGTGCTTCACAGTTTGTAACCAATTACCTTGTGGTCCT
AATAACACCTTTAGTGATTCAATACATATATCCCAATAATGGCAACATTCTCTTAAAAAA
GAAAAAGCCTTCCCAGCTGTAAAATAATGTTACATAATTGCATTTGTTATGGTCTGATTC
TGTATTCTCAAGGTGAGGGGCAGGAGTGGGGTTAGGGGAGACAGATTCCTTCTGTCTCCA
AAGCTGTCCGAGGTCTCAGACTGGTCGAAGCATTTTGCCTTGGCACTGTCATCTTCCGGA
CAGGAGCATCTGGGCTCACTCCTGGCATCTCGGATCTATTGCCCTGCAGTACCCTCCGGG
CACTGGAGCAGCGTCACGGTACAGACAAGTAGAGCCAGCACAGAGTGCAGCCACTGAGCC
CGACTGCATTGCCTACCTAACCTTGAGGTTTAGAGCGAGTCTGGGAATTTGAGCAAGGAA
GAGAGAGAAAGCTTATGTTCATCCCCAAATTGAAGGCTCAACAGCCGGCTTGAGAAAAAT
GAGTTGCCGAAAGCCGAAATTCTTCAGAGAGAATTTTCCCAAAGTGACGTTTGACATTGC
CCTGTTTGTTTATTTTCTTCCTGGCCAAAGGGCCAACTCCATATTGTGTCCTAATTAAAC
AGGATAACAAAATAGAGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACTCTGCAGCCATCTGAACTGGGTGCTTCACAGTTTGTAACCAATTACCTTGTGGTCCT
AATAACACCTTTAGTGATTCAATACATATATCCCAATAATGGCAACATTCTCTTAAAAAA
GAAAAAGCCTTCCCAGCTGTAAAATAATGTTACATAATTGCATTTGTTATGGTCTGATTC
TGTATTCTCAAGGTGAGGGGCAGGAGTGGGGTTAGGGGAGACAGATTCCTTCTGTCTCCA
AAGCTGTCCGAGGTCTCAGACTGGTCGAAGCATTTTGCCTTGGCACTGTCATCTTCCGGA
CAGGAGCATCTGGGCTCACTCCTGGCATCTCGGATCTATTGCCCTGCAGTACCCTCCGGG
CACTGGAGCAGCGTCACGGTACAGACAAGTAGAGCCAGCACAGAGTGCAGCCACTGAGCC
CGACTGCATTGCCTACCTAACCTTGAGGTTTAGAGCGAGTCTGGGAATTTGAGCAAGGAA
GAGAGAGAAAGCTTATGTTCATCCCCAAATTGAAGGCTCAACAGCCGGCTTGAGAAAAAT
GAGTTGCCGAAAGCCGAAATTCTTCAGAGAGAATTTTCCCAAAGTGACGTTTGACATTGC
CCTGTTTGTTTATTTTCTTCCTGGCCAAAGGGCCAACTCCATATTGTGTCCTAATTAAAC
AGGATAACAAAATAGAGCGGCCGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-684, gnl|bosTau2|chr29 (22832753-22832069)
               

               
               1-684, gnl|Hg17|chr11 (128656791-128657456)
               

               
               1-684, gnl|Mm7|chr9 (31931489-31930809)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-684, gnl|bosTau2|chr29 (22832753-22832069)
               

               
               1-684, gnl|Hg17|chr11 (128656791-128657456)
               

               
               1-684, gnl|Mm7|chr9 (31931489-31930809)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lin (0.145603)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)

	1-684, gnl\|bosTau2\|chr29 (22832753-22832069)
	1-684, gnl\|Hg17\|chr11 (128656791-128657456)
	1-684, gnl\|Mm7\|chr9 (31931489-31930809)