Non-Coding RNA Search

Ss1.1-rlin18_k4.5

Sequence:


               
               TCCCAAGATGCCACCAATCCTGTTATGCCACAGTGGGAGCTCCAGAATTTATTCTACTTT
TGAAGAAAATTACGAATATAAAAAGGTTGACAGTGGTTTATATACATTAACACTGACTTT
AAGTGGAGACAGATTTCAGTAATTTTCCATAACCTTTAAAAATGCTTAGTTTAATGACTT
TTTAAATCTGTAAATTGTAAAGAAGCTGAAAAAAAGAATTATTATTTATCCTGCCTCAAA
ATAAAAACTGCTTGACCAGGTGAGCACAAGGATATTGAGCTTAATGTTCTGTATTTTCTC
TTGGATCCTGTCTTCCATATCAGATTATATTCCATCAAAGGGTATGTACCTCTTCTAAGA
AGGTAATTAATTGCGCAAAATTTATCCCCTCGTTCTGTGTTTTCTCATCTTCTATGCCTG
AAACTAGAACAGAGTTTACCAAGCCTTTAGAAATCAGGTCTGTTATATTTTATTTTTGTT
TCTTCTTTTTCTCAGGATTTTTATTTTATTTCAGTTTTATTGAGACATAGTTGACATATA
GCTCTGCATAAGTTTAAGATAAACAGCATAATAACTTATGTACATTATGAAATGCTACCA
CAATAAGTTTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCCAAGATGCCACCAATCCTGTTATGCCACAGTGGGAGCTCCAGAATTTATTCTACTTT
TGAAGAAAATTACGAATATAAAAAGGTTGACAGTGGTTTATATACATTAACACTGACTTT
AAGTGGAGACAGATTTCAGTAATTTTCCATAACCTTTAAAAATGCTTAGTTTAATGACTT
TTTAAATCTGTAAATTGTAAAGAAGCTGAAAAAAAGAATTATTATTTATCCTGCCTCAAA
ATAAAAACTGCTTGACCAGGTGAGCACAAGGATATTGAGCTTAATGTTCTGTATTTTCTC
TTGGATCCTGTCTTCCATATCAGATTATATTCCATCAAAGGGTATGTACCTCTTCTAAGA
AGGTAATTAATTGCGCAAAATTTATCCCCTCGTTCTGTGTTTTCTCATCTTCTATGCCTG
AAACTAGAACAGAGTTTACCAAGCCTTTAGAAATCAGGTCTGTTATATTTTATTTTTGTT
TCTTCTTTTTCTCAGGATTTTTATTTTATTTCAGTTTTATTGAGACATAGTTGACATATA
GCTCTGCATAAGTTTAAGATAAACAGCATAATAACTTATGTACATTATGAAATGCTACCA
CAATAAGTTTAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               46-354, gnl|bosTau2|chr6 (48668094-48668394)
               

               
               46-354, gnl|Hg17|chr4 (72261476-72261774)
               


               
               470-612, gnl|bosTau2|chrX (1330140-1330289)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               46-354, gnl|bosTau2|chr6 (48668094-48668394)
               

               
               46-354, gnl|Hg17|chr4 (72261476-72261774)
               


               
               470-612, gnl|bosTau2|chrX (1330140-1330289)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cmu (0.186393)
               

               
               lin (0.145603)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.186393)
               

               
               lin (0.145603)

	46-354, gnl\|bosTau2\|chr6 (48668094-48668394)
	46-354, gnl\|Hg17\|chr4 (72261476-72261774)

	470-612, gnl\|bosTau2\|chrX (1330140-1330289)