Non-Coding RNA Search

Ss1.1-rlin23_m20.5

Sequence:


               
               AAGAGGAAGAGAGTCGCTTTTAACGGGTCCTAGTGCCCTTTTATATTAGCTTATTTCGTA
ACAGTCTTTAATTCATTTAGATCAGCTCCACCCAGCTTAGTGGGAAAGTGCACACAGATT
GCAAAACTGACATCCCATTTTATGGCAATAATGACCTTTATTTAAATTTTCATGACATTA
TTTTTTCTTCTTCAATTTTTTTTTTTTTTTTTTTTAACCAGCACAGCTTAAGTTCTAAGC
AGATAGTTGGGAAATTAAGTAATAAGTTAGGAAATATAATAAATGAATACAAATGCCTGC
TCCTGTTAATGCTGCTTGTGAAAGCAAGAGTGATATTTATTTTCTAGATTATTCATGGTA
AAAGTTGAGAACTTTTTTGGAGTCAAGTGTGAATAAAAAAGTGACAGAATATAATTATGT
GAAACACCTTCTGTAGGTTAATTGGTAAGTTATAAAATTTTATAGTTGCTTAAGCTCAGT
AGCCTTTGGGGAATCCTATTAATAGGCAATTTTGAATGTTTCTGTTCAATTCTATGAAAG
ATTATAAACGAAGGTGATCATCAGCCTTTTTTTTTACATCTACAGTGACAATAAATCAAG
CAGGAAGTATAAGATTTAATATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAGGAAGAGAGTCGCTTTTAACGGGTCCTAGTGCCCTTTTATATTAGCTTATTTCGTA
ACAGTCTTTAATTCATTTAGATCAGCTCCACCCAGCTTAGTGGGAAAGTGCACACAGATT
GCAAAACTGACATCCCATTTTATGGCAATAATGACCTTTATTTAAATTTTCATGACATTA
TTTTTTCTTCTTCAATTTTTTTTTTTTTTTTTTTTAACCAGCACAGCTTAAGTTCTAAGC
AGATAGTTGGGAAATTAAGTAATAAGTTAGGAAATATAATAAATGAATACAAATGCCTGC
TCCTGTTAATGCTGCTTGTGAAAGCAAGAGTGATATTTATTTTCTAGATTATTCATGGTA
AAAGTTGAGAACTTTTTTGGAGTCAAGTGTGAATAAAAAAGTGACAGAATATAATTATGT
GAAACACCTTCTGTAGGTTAATTGGTAAGTTATAAAATTTTATAGTTGCTTAAGCTCAGT
AGCCTTTGGGGAATCCTATTAATAGGCAATTTTGAATGTTTCTGTTCAATTCTATGAAAG
ATTATAAACGAAGGTGATCATCAGCCTTTTTTTTTACATCTACAGTGACAATAAATCAAG
CAGGAAGTATAAGATTTAATATGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-624, gnl|bosTau2|chr2 (26504876-26505481)
               

               
               1-624, gnl|Hg17|chr2 (158097719-158097131)
               

               
               1-624, gnl|Mm7|chr2 (58134437-58133849)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-624, gnl|bosTau2|chr2 (26504876-26505481)
               

               
               1-624, gnl|Hg17|chr2 (158097719-158097131)
               

               
               1-624, gnl|Mm7|chr2 (58134437-58133849)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbl (0.344392)
               

               
               lin (0.145603)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.344392)
               

               
               lin (0.145603)

	1-624, gnl\|bosTau2\|chr2 (26504876-26505481)
	1-624, gnl\|Hg17\|chr2 (158097719-158097131)
	1-624, gnl\|Mm7\|chr2 (58134437-58133849)