Ss1.1-rlin25_i11.5
|
GTTGTTACCTCTCCCCTCACAATACATTAATAGCTCCAGCTCTTCATATAAAAATTGATT
CTATGAGTCTGAGTACTTTCGAAAGTACAGCAGAAAGTCAAGAAGGGGAATGCAATCATT
AAAGATAAATGTTGGAATCTCTCCAACTATAGATTTTATTGGCTTGTCATTTTCCTTGAA
AAAACCCTTTAAAACTTGACTTGAACAAGACTCAATTTCTGGGCTTAGAAGTGAGATAAA
GCCACTCGTGTAATTCCTTGGATTCATATTGGAGAATCAGCAGAGAATACGAGTGGCCAC
AGCATAACTGCCGGACAAACATGAATAAATTAAACAAAAAGATCCAGTACTTAGAAATCC
TCTGCCATAGAGCTTAATCTTTTCTTCTGCCCTCATCAATGTGAAATAAATCTATCCTTC
TTTCTCGTGTTCTGAAATCTTTTCATACCGCTAGACTGTTGGGCCTGAGAGGGGAGGGGA
AACTCACGAGGTACAAGTTCATAAAGAGCACAGTTTCTTTCCCAAACTCTTCCAAGTGGA
TCAGTGGAAAGCAGTGTAGACACAATTAAAATCTACAAGCTTAGGACTCTGTGCCAAAAT
TCTTAATTTTAAATGGAAATATTTATATAAAAATATATGTATTTCATCTACTGGAAATAA
ATTAAAACTGACTTTTAATTTAGAATTTTTATTATAAGACTATGATTCATCAAGAGAGGT
GATGTTTATTTTTGAGAATTTGAAAAGTTGCAGTTTATGAAATCTGAAAAGAAAAATTTT
AATTGTTTCCTTATTTTTTTCATATTAATAAATATTATAAGGAGCCTAATTTTCTGGAAC
CGAAGGTGAAAATATGAAAATGTTTATTATGATACGTCTTGTTAAGCATGTAGACCAAAT
TCAGATTTCACTAATGAAAAGTCAGATAAAAATTTGGAAGACATGTAAATTTCTAAAATG
GAGCACTTATGTCATTGTATCTTTATTATCAGTTTAAAATTTTTCCTTATTTGTGGAATG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTTGTTACCTCTCCCCTCACAATACATTAATAGCTCCAGCTCTTCATATAAAAATTGATT
CTATGAGTCTGAGTACTTTCGAAAGTACAGCAGAAAGTCAAGAAGGGGAATGCAATCATT
AAAGATAAATGTTGGAATCTCTCCAACTATAGATTTTATTGGCTTGTCATTTTCCTTGAA
AAAACCCTTTAAAACTTGACTTGAACAAGACTCAATTTCTGGGCTTAGAAGTGAGATAAA
GCCACTCGTGTAATTCCTTGGATTCATATTGGAGAATCAGCAGAGAATACGAGTGGCCAC
AGCATAACTGCCGGACAAACATGAATAAATTAAACAAAAAGATCCAGTACTTAGAAATCC
TCTGCCATAGAGCTTAATCTTTTCTTCTGCCCTCATCAATGTGAAATAAATCTATCCTTC
TTTCTCGTGTTCTGAAATCTTTTCATACCGCTAGACTGTTGGGCCTGAGAGGGGAGGGGA
AACTCACGAGGTACAAGTTCATAAAGAGCACAGTTTCTTTCCCAAACTCTTCCAAGTGGA
TCAGTGGAAAGCAGTGTAGACACAATTAAAATCTACAAGCTTAGGACTCTGTGCCAAAAT
TCTTAATTTTAAATGGAAATATTTATATAAAAATATATGTATTTCATCTACTGGAAATAA
ATTAAAACTGACTTTTAATTTAGAATTTTTATTATAAGACTATGATTCATCAAGAGAGGT
GATGTTTATTTTTGAGAATTTGAAAAGTTGCAGTTTATGAAATCTGAAAAGAAAAATTTT
AATTGTTTCCTTATTTTTTTCATATTAATAAATATTATAAGGAGCCTAATTTTCTGGAAC
CGAAGGTGAAAATATGAAAATGTTTATTATGATACGTCTTGTTAAGCATGTAGACCAAAT
TCAGATTTCACTAATGAAAAGTCAGATAAAAATTTGGAAGACATGTAAATTTCTAAAATG
GAGCACTTATGTCATTGTATCTTTATTATCAGTTTAAAATTTTTCCTTATTTGTGGAATG |
|
2-247, gnl|bosTau2|chr11 (4840115-4840361) |
|
2-247, gnl|canFam2|chr10 (43461806-43461244) |
|
2-247, gnl|dasNov1|scaffold_4139 (15982-16516) |
|
2-247, gnl|echTel1|scaffold_324822 (38258-38856) |
|
2-247, gnl|hg17|chr2 (102784281-102784859) |
|
2-247, gnl|Hg17|chr2 (102784606-102784859) |
|
2-247, gnl|loxAfr1|scaffold_50732 (8341-8906) |
|
2-247, gnl|mm7|chr1 (41010288-41010868) |
|
2-247, gnl|Mm7|chr1 (41010580-41010865) |
|
2-247, gnl|monDom2|scaffold_11 (20953476-20954102) |
|
2-247, gnl|oryCun1|scaffold_198734 (44331-44923) |
|
2-247, gnl|panTro1|chr12 (105673048-105673630) |
|
2-247, gnl|rheMac2|chr13 (102616984-102617564) |
|
2-247, gnl|rn3|chr9 (39917179-39917750) |
| |
|
269-1020, gnl|bosTau2|chr11 (4840404-4841189) |
|
269-1020, gnl|Hg17|chr2 (102784879-102785608) |
|
269-1020, gnl|Mm7|chr1 (41011074-41011963) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-247, gnl|bosTau2|chr11 (4840115-4840361) |
|
2-247, gnl|canFam2|chr10 (43461806-43461244) |
|
2-247, gnl|dasNov1|scaffold_4139 (15982-16516) |
|
2-247, gnl|echTel1|scaffold_324822 (38258-38856) |
|
2-247, gnl|hg17|chr2 (102784281-102784859) |
|
2-247, gnl|Hg17|chr2 (102784606-102784859) |
|
2-247, gnl|loxAfr1|scaffold_50732 (8341-8906) |
|
2-247, gnl|mm7|chr1 (41010288-41010868) |
|
2-247, gnl|Mm7|chr1 (41010580-41010865) |
|
2-247, gnl|monDom2|scaffold_11 (20953476-20954102) |
|
2-247, gnl|oryCun1|scaffold_198734 (44331-44923) |
|
2-247, gnl|panTro1|chr12 (105673048-105673630) |
|
2-247, gnl|rheMac2|chr13 (102616984-102617564) |
|
2-247, gnl|rn3|chr9 (39917179-39917750) |
| |
|
269-1020, gnl|bosTau2|chr11 (4840404-4841189) |
|
269-1020, gnl|Hg17|chr2 (102784879-102785608) |
|
269-1020, gnl|Mm7|chr1 (41011074-41011963) |
|
sme (0.610874) |
|
sin (0.524843) |
|
rec (0.519211) |
|
lin (0.436808) |
|
ste (0.270416) |
|
kid (0.259471) |
|
ill (0.175593) |
|
nco (0.161734) |
|
tbr (0.154178) |
|
bfe (0.149858) |
|
ret (0.128733) |
|
pgl (0.118483) |
|
jej (0.0989218) |
|
ldo (0.0970026) |
|
sme (0.610874) |
|
sin (0.524843) |
|
rec (0.519211) |
|
lin (0.436808) |
|
ste (0.270416) |
|
kid (0.259471) |
|
ill (0.175593) |
|
nco (0.161734) |
|
tbr (0.154178) |
|
bfe (0.149858) |
|
ret (0.128733) |
|
pgl (0.118483) |
|
jej (0.0989218) |
|
ldo (0.0970026) |
