Non-Coding RNA Search

Ss1.1-rlin25_p5.5

Sequence:


               
               GAAGGGTTGGCTACAGTGCTTGCTGGAACGCTACCACTCGGATGCCATTTGGCTTCTGCT
AGGGCAAGATGGCAGAGGTATTTTTGTTTGTTTGTTTTTTAATTCTTTCCTACTTCTAGT
TCCTTTTGTTTTTCTGTATTTGGGGTTTCTAAAGTAGAGTGGTGGTTGATTTTTAGTTCC
TCTTAAAATCTAACCTGATCAGACATTATCCCACTTAACATTTAGACATTTAGAGATAAA
CACTCAGCTCATGTTAATACTTTAAAGTTTTTGCAGGTGTGATTTGGAGGACCAAAGAAA
TTGCTAGCTATTAATTCATCTTTCTGAGATCAATTGTATTCCTTTTTAATGACTCTTTAT
TCTAACATTCCCTAGAAGTGTCCTCATAAAAGTCTAAAGTATCCACAGTATTGGTCTGGA
GTATTGGTAAATGCAAAGTAATAACCTTGTCTATTTTACTCTGGTCTGTAGTACTCCAAA
ATTACCTTTTCACATCCATGGCCTTGAGTCCATTTTGGGGGTTTTTTAAGAATTTGATGC
ATTTAAATACACTGTTCGATTTAATTGTTTGAATTTTATGTATGGTGTATATTGTTCCTG
AAGTTGGTTTTATTTAAATTATTAAAGTGTTACGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGGGTTGGCTACAGTGCTTGCTGGAACGCTACCACTCGGATGCCATTTGGCTTCTGCT
AGGGCAAGATGGCAGAGGTATTTTTGTTTGTTTGTTTTTTAATTCTTTCCTACTTCTAGT
TCCTTTTGTTTTTCTGTATTTGGGGTTTCTAAAGTAGAGTGGTGGTTGATTTTTAGTTCC
TCTTAAAATCTAACCTGATCAGACATTATCCCACTTAACATTTAGACATTTAGAGATAAA
CACTCAGCTCATGTTAATACTTTAAAGTTTTTGCAGGTGTGATTTGGAGGACCAAAGAAA
TTGCTAGCTATTAATTCATCTTTCTGAGATCAATTGTATTCCTTTTTAATGACTCTTTAT
TCTAACATTCCCTAGAAGTGTCCTCATAAAAGTCTAAAGTATCCACAGTATTGGTCTGGA
GTATTGGTAAATGCAAAGTAATAACCTTGTCTATTTTACTCTGGTCTGTAGTACTCCAAA
ATTACCTTTTCACATCCATGGCCTTGAGTCCATTTTGGGGGTTTTTTAAGAATTTGATGC
ATTTAAATACACTGTTCGATTTAATTGTTTGAATTTTATGTATGGTGTATATTGTTCCTG
AAGTTGGTTTTATTTAAATTATTAAAGTGTTACGAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               31-636, gnl|bosTau2|chr10 (45748060-45748671)
               

               
               31-636, gnl|Hg17|chr14 (54379094-54378488)
               

               
               31-636, gnl|Mm7|chr14 (42475602-42475008)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               31-636, gnl|bosTau2|chr10 (45748060-45748671)
               

               
               31-636, gnl|Hg17|chr14 (54379094-54378488)
               

               
               31-636, gnl|Mm7|chr14 (42475602-42475008)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lin (0.145603)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)
               

               
               ret (0.128733)

	31-636, gnl\|bosTau2\|chr10 (45748060-45748671)
	31-636, gnl\|Hg17\|chr14 (54379094-54378488)
	31-636, gnl\|Mm7\|chr14 (42475602-42475008)