Non-Coding RNA Search

Ss1.1-rlin27_g1.5

Sequence:


               
               TCCAGTCATCTGCCCGAGGTAGCAACATGCTCCTTTGTATTTGAGAAGTAAAAACTCCGA
ATACTGCACAGCAACATGATCACTAGAAGTCACAGTACTGCTCCTTCTTCTGCTTTTGCT
TTCCCCGTATGTATGGGACTGGGCTACCTCTGCCTAAGATGGCTTCTAGCAACACAACAG
TAGAACTGACACCAAGTAGAGAGTTTCACAAACTTTCTCCATTCATTGTCCAGGTAGAAG
CTGATTTGTAGCATTTGCTAAGTGGATTAGAAGAATGTGCTGCTTTTTCTGAACTCCTTT
GCCTGGATTGGCACCTCTGTGCAATAACAAGAAAATGGCTTCTTAAAAGGTGTCATTGTG
GTTTCAAGGATAAATTAAACTTTAGTGATTTCAGAATCAGGAAGAGTTTGGTGGGAATAA
AATCCACTGTAAATGTACTTTAGTTTTAATTCAATCTGAGTGCACTAACTGGAGAAATGA
GATATTATATGCTTCTCTTAATTTGAGAAGTATCTGACATTTGTTGTCATTCCATCAATT
TTTTTTTTTAGAGGCTTGTTCATAATTTAAAATGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCAGTCATCTGCCCGAGGTAGCAACATGCTCCTTTGTATTTGAGAAGTAAAAACTCCGA
ATACTGCACAGCAACATGATCACTAGAAGTCACAGTACTGCTCCTTCTTCTGCTTTTGCT
TTCCCCGTATGTATGGGACTGGGCTACCTCTGCCTAAGATGGCTTCTAGCAACACAACAG
TAGAACTGACACCAAGTAGAGAGTTTCACAAACTTTCTCCATTCATTGTCCAGGTAGAAG
CTGATTTGTAGCATTTGCTAAGTGGATTAGAAGAATGTGCTGCTTTTTCTGAACTCCTTT
GCCTGGATTGGCACCTCTGTGCAATAACAAGAAAATGGCTTCTTAAAAGGTGTCATTGTG
GTTTCAAGGATAAATTAAACTTTAGTGATTTCAGAATCAGGAAGAGTTTGGTGGGAATAA
AATCCACTGTAAATGTACTTTAGTTTTAATTCAATCTGAGTGCACTAACTGGAGAAATGA
GATATTATATGCTTCTCTTAATTTGAGAAGTATCTGACATTTGTTGTCATTCCATCAATT
TTTTTTTTTAGAGGCTTGTTCATAATTTAAAATGTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               105-391, gnl|bosTau2|chr14 (36280982-36280684)
               

               
               105-391, gnl|Hg17|chr8 (104481658-104481372)
               

               
               105-391, gnl|Mm7|chr15 (39101204-39100915)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               105-391, gnl|bosTau2|chr14 (36280982-36280684)
               

               
               105-391, gnl|Hg17|chr8 (104481658-104481372)
               

               
               105-391, gnl|Mm7|chr15 (39101204-39100915)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lin (0.145603)
               

               
               nmm (0.132802)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)
               

               
               nmm (0.132802)

	105-391, gnl\|bosTau2\|chr14 (36280982-36280684)
	105-391, gnl\|Hg17\|chr8 (104481658-104481372)
	105-391, gnl\|Mm7\|chr15 (39101204-39100915)