Non-Coding RNA Search

Ss1.1-rlin29_g17.5

Sequence:


               
               TACTGTACATCAGAGAACGCATACAGGAGAAAAACCCTATAAGTGCAATGAATGTGGGAA
AGCCTTCAGTGAAAAGTCACCACTGATTAAACATCAGAGAATTCATACAGGAGAGAGACC
CTATGAATGCAGTGACTGTAGGAAAGCATTCAGTAGGAAGTCAACTCTCATCAAGCACCA
GCGAATTCATACAGGAGAAAAACCCTACGAATGTAGTGAATGTGGGAAGGCCTTTAGTGT
GAAATCAGCTCTCATTGTACATCACAGAACTCATACAGGAGAGAAACCTTATGAATGCAG
AGAATGTGGCAAAGCCTTCAGTGGAAAGTCAACTCTAATTAAACATCAAAAAAGTCACCC
AGGAGATAAAACCTATTAATATACTTCAGAGTGAGATAATTTACTAATTATACTTCATTA
TATATATTAATTCATCCTGGGTAGTAACCTTATAAATATTAAGAATGTCAAAAACTCTTC
ACAAACTATCTAATGTTCATTTAACTTAAACAGCCCAAAAGCATAATTCCAGAAGCATAT
AATAAATGCGATCAATTTTTCACCCAGAATCCGTACACACGAGTGGAGAACTGTACCTCA
GAGAATTCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTGTACATCAGAGAACGCATACAGGAGAAAAACCCTATAAGTGCAATGAATGTGGGAA
AGCCTTCAGTGAAAAGTCACCACTGATTAAACATCAGAGAATTCATACAGGAGAGAGACC
CTATGAATGCAGTGACTGTAGGAAAGCATTCAGTAGGAAGTCAACTCTCATCAAGCACCA
GCGAATTCATACAGGAGAAAAACCCTACGAATGTAGTGAATGTGGGAAGGCCTTTAGTGT
GAAATCAGCTCTCATTGTACATCACAGAACTCATACAGGAGAGAAACCTTATGAATGCAG
AGAATGTGGCAAAGCCTTCAGTGGAAAGTCAACTCTAATTAAACATCAAAAAAGTCACCC
AGGAGATAAAACCTATTAATATACTTCAGAGTGAGATAATTTACTAATTATACTTCATTA
TATATATTAATTCATCCTGGGTAGTAACCTTATAAATATTAAGAATGTCAAAAACTCTTC
ACAAACTATCTAATGTTCATTTAACTTAAACAGCCCAAAAGCATAATTCCAGAAGCATAT
AATAAATGCGATCAATTTTTCACCCAGAATCCGTACACACGAGTGGAGAACTGTACCTCA
GAGAATTCAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               367-612, gnl|bosTau2|chrX (29044617-29044377)
               

               
               367-612, gnl|Hg17|chrX (46115543-46115276)
               

               
               367-612, gnl|Mm7|chr7 (11121697-11121968)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               367-612, gnl|bosTau2|chrX (29044617-29044377)
               

               
               367-612, gnl|Hg17|chrX (46115543-46115276)
               

               
               367-612, gnl|Mm7|chr7 (11121697-11121968)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               lin (0.436808)
               

               
               liv (0.146284)
               

               
               bla (0.124347)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.436808)
               

               
               liv (0.146284)
               

               
               bla (0.124347)

	367-612, gnl\|bosTau2\|chrX (29044617-29044377)
	367-612, gnl\|Hg17\|chrX (46115543-46115276)
	367-612, gnl\|Mm7\|chr7 (11121697-11121968)