Non-Coding RNA Search

Ss1.1-rlin32_g11.5

Sequence:


               
               TGAAATATGATTTCTCAAAAATGAATTTGATAATTTCAAGTGTGACATGCATATATGCTA
AAAGAATGCTAAAAATATTATCCTTTTATGGGAAGCTAAATTTGGGAGTATGTGAGCATT
TTAATGTACACCATTTTTTTCCCCTCAGAAAACAGTTGTTTTTTTCCTCTCAGAAATGTG
TAGGCATTATTGCAAGTGAGTTTCAGTTCTGCTACGTGGAGTATTTGATGTTTTATTTGA
AAGAATACAGCACTAAAGAACTGATAGATTGACCAATTATTCATCTTTTAGTTTGGATGA
TTATAATTCAGCTGACCACATCTAGTTTGATGTTTGATGATCTGAAAAATATTTCACAGT
GGTGAGAAATGCTCAAAGGCTGTACGACGCAGAAAATTGTTATTGGTCTGACAGTACTTG
ATGCAACAAGAAGGGGCCTATAGTACGTAGCCCTTGAAAATCTGTCTTTAATACGCAAAG
CTGTAACTGAATTAGCTGTTTCCCTATTGATTCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAAATATGATTTCTCAAAAATGAATTTGATAATTTCAAGTGTGACATGCATATATGCTA
AAAGAATGCTAAAAATATTATCCTTTTATGGGAAGCTAAATTTGGGAGTATGTGAGCATT
TTAATGTACACCATTTTTTTCCCCTCAGAAAACAGTTGTTTTTTTCCTCTCAGAAATGTG
TAGGCATTATTGCAAGTGAGTTTCAGTTCTGCTACGTGGAGTATTTGATGTTTTATTTGA
AAGAATACAGCACTAAAGAACTGATAGATTGACCAATTATTCATCTTTTAGTTTGGATGA
TTATAATTCAGCTGACCACATCTAGTTTGATGTTTGATGATCTGAAAAATATTTCACAGT
GGTGAGAAATGCTCAAAGGCTGTACGACGCAGAAAATTGTTATTGGTCTGACAGTACTTG
ATGCAACAAGAAGGGGCCTATAGTACGTAGCCCTTGAAAATCTGTCTTTAATACGCAAAG
CTGTAACTGAATTAGCTGTTTCCCTATTGATTCTCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               169-516, gnl|bosTau2|chr5 (50162519-50162867)
               

               
               169-516, gnl|Hg17|chr6 (139541705-139542017)
               

               
               169-516, gnl|Mm7|chr10 (17624055-17623743)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               169-516, gnl|bosTau2|chr5 (50162519-50162867)
               

               
               169-516, gnl|Hg17|chr6 (139541705-139542017)
               

               
               169-516, gnl|Mm7|chr10 (17624055-17623743)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sin (0.349895)
               

               
               ece (0.229305)
               

               
               lin (0.145603)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.349895)
               

               
               ece (0.229305)
               

               
               lin (0.145603)

	169-516, gnl\|bosTau2\|chr5 (50162519-50162867)
	169-516, gnl\|Hg17\|chr6 (139541705-139542017)
	169-516, gnl\|Mm7\|chr10 (17624055-17623743)