Non-Coding RNA Search

Ss1.1-rlin33_l4.5

Sequence:


               
               AAAGAAAAGACGAAGGAACTGAAAAACTCACTAACTAACAGATGCTTTAGTGAAGCAAGA
TGCAAAACAGTACTGAGAAAGTTCTTGGAAAAAATGAAGTCAGTCTGATATTTAATGCCA
GTATGTTGATCTGATGGTCTAAAAGTTGACATGGCAGGCCTTGCAATTTAGAGTCAAGCA
GGTAAGAAGGAGAGAAGTTTGCCTGCTTAATTACTTAAACCATGCACTTTTGTTCTGACG
CCAACTATTTAAAAGGCAAATAACAAAACAACCAAACATTTGAAGAAGTTTTGAAAGAGG
AGTTGAAGGAAATGACTAACAGAGGTAGAAAGGGACAATAAATATTTCCTGTTCAGCAAC
AGGAGTTAGATGATCTCCGTTCGGATGTAATTATACTCTGAAGAGTGTAATTCTACTTTG
AAGTGTGTCGTCAGAGAAAAGTATATGCTTTAACATCTAACAGAAGTCACATTCCTAATG
CATCGAGTGGGAACTGTATAGTTAAATGGTACTTTCTTTGCTGAATGTGACAGAATCCAT
ACCAGCTCATACATCAACACAGCTATGCTATCTTATGCTAGATGTTTTCATCCTTACATA
TGGCACACAGAAGAAAGTGTTTTTCTACTATAAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGAAAAGACGAAGGAACTGAAAAACTCACTAACTAACAGATGCTTTAGTGAAGCAAGA
TGCAAAACAGTACTGAGAAAGTTCTTGGAAAAAATGAAGTCAGTCTGATATTTAATGCCA
GTATGTTGATCTGATGGTCTAAAAGTTGACATGGCAGGCCTTGCAATTTAGAGTCAAGCA
GGTAAGAAGGAGAGAAGTTTGCCTGCTTAATTACTTAAACCATGCACTTTTGTTCTGACG
CCAACTATTTAAAAGGCAAATAACAAAACAACCAAACATTTGAAGAAGTTTTGAAAGAGG
AGTTGAAGGAAATGACTAACAGAGGTAGAAAGGGACAATAAATATTTCCTGTTCAGCAAC
AGGAGTTAGATGATCTCCGTTCGGATGTAATTATACTCTGAAGAGTGTAATTCTACTTTG
AAGTGTGTCGTCAGAGAAAAGTATATGCTTTAACATCTAACAGAAGTCACATTCCTAATG
CATCGAGTGGGAACTGTATAGTTAAATGGTACTTTCTTTGCTGAATGTGACAGAATCCAT
ACCAGCTCATACATCAACACAGCTATGCTATCTTATGCTAGATGTTTTCATCCTTACATA
TGGCACACAGAAGAAAGTGTTTTTCTACTATAAATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-632, gnl|bosTau2|chr19 (9807110-9806502)
               

               
               2-632, gnl|Hg17|chr17 (26669495-26668864)
               

               
               2-632, gnl|Mm7|chr11 (79608719-79608191)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-632, gnl|bosTau2|chr19 (9807110-9806502)
               

               
               2-632, gnl|Hg17|chr17 (26669495-26668864)
               

               
               2-632, gnl|Mm7|chr11 (79608719-79608191)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               lin (0.145603)
               

               
               ova (0.129132)
               

               
               ret (0.128733)
               

               
               spc (0.113366)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)
               

               
               ova (0.129132)
               

               
               ret (0.128733)
               

               
               spc (0.113366)

	2-632, gnl\|bosTau2\|chr19 (9807110-9806502)
	2-632, gnl\|Hg17\|chr17 (26669495-26668864)
	2-632, gnl\|Mm7\|chr11 (79608719-79608191)