Non-Coding RNA Search

Ss1.1-rlin34_h23.5

Sequence:


               
               TGCTCTGTTGTTGATGATATGTTACCATTATTTTGAATCCTGGCCTGGTCAAGTACCACC
AAATTTTGTTCTTTAATCTTGCAGAAAAGTTGATTGCAAAGTGTGGTAGAAAATAATAAA
AATAATGGTAGCAGTAGTTAGTCTCTAATTTTCAGAGTTTGTTGGATTCACAGAGAATTT
ATAAATAAGAATTTATCTTTATGAATGAGTTACATTGTTCTACAATTTTGATCAATGGTA
TTTAAGCTTGTATATGCTAAGTGTCTTTTGAGCCCCTTTGAGCCAAAAATGTCTCCTTTT
TTTCTTAGAAACCATAAATTTTTCTTCATTTGTTGGCTTCACTTGGATTTGGATCCAAAT
TTGACTGCATCATACCCTGATCAACTGAGCATTTGCTTAAATAGCGTATTCATCAAATCT
TTAGCGCCAGTTTCCTCAAGAAACAGCTTTCATGCTTACTCTTTAAAGACAAAGAATGTT
TATCCTGAGATTGGTATTGCACTATTTTATCCTGTTCTGCAGATCTGTATTCTGAAATGT
ACACTTTAATCCATCTTCTTCCTCTGTTCACTGAAATTAAGTTGAATTTGAATGGATGAA
AAACAAAATGTATGTTAATACAATCTCTTATCTAGAGCATTCAAAGCCTGGCTGTCTCTG
TTTGCTGTGTAACAGATGCAGAACCGTTTGCATTTTAAGAAAATGTACATCAGAATATGT
ATTATCAGGTGTTTAAAAATCTCAACCTTTTGATTTGTAAGGAATATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCTCTGTTGTTGATGATATGTTACCATTATTTTGAATCCTGGCCTGGTCAAGTACCACC
AAATTTTGTTCTTTAATCTTGCAGAAAAGTTGATTGCAAAGTGTGGTAGAAAATAATAAA
AATAATGGTAGCAGTAGTTAGTCTCTAATTTTCAGAGTTTGTTGGATTCACAGAGAATTT
ATAAATAAGAATTTATCTTTATGAATGAGTTACATTGTTCTACAATTTTGATCAATGGTA
TTTAAGCTTGTATATGCTAAGTGTCTTTTGAGCCCCTTTGAGCCAAAAATGTCTCCTTTT
TTTCTTAGAAACCATAAATTTTTCTTCATTTGTTGGCTTCACTTGGATTTGGATCCAAAT
TTGACTGCATCATACCCTGATCAACTGAGCATTTGCTTAAATAGCGTATTCATCAAATCT
TTAGCGCCAGTTTCCTCAAGAAACAGCTTTCATGCTTACTCTTTAAAGACAAAGAATGTT
TATCCTGAGATTGGTATTGCACTATTTTATCCTGTTCTGCAGATCTGTATTCTGAAATGT
ACACTTTAATCCATCTTCTTCCTCTGTTCACTGAAATTAAGTTGAATTTGAATGGATGAA
AAACAAAATGTATGTTAATACAATCTCTTATCTAGAGCATTCAAAGCCTGGCTGTCTCTG
TTTGCTGTGTAACAGATGCAGAACCGTTTGCATTTTAAGAAAATGTACATCAGAATATGT
ATTATCAGGTGTTTAAAAATCTCAACCTTTTGATTTGTAAGGAATATA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-768, gnl|bosTau2|chr14 (19065012-19065780)
               

               
               1-768, gnl|Hg17|chr8 (67708611-67707890)
               

               
               1-768, gnl|Mm7|chr1 (9866569-9865891)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-768, gnl|bosTau2|chr14 (19065012-19065780)
               

               
               1-768, gnl|Hg17|chr8 (67708611-67707890)
               

               
               1-768, gnl|Mm7|chr1 (9866569-9865891)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               lin (0.291206)
               

               
               liv (0.146284)
               

               
               thg (0.126791)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.291206)
               

               
               liv (0.146284)
               

               
               thg (0.126791)

	1-768, gnl\|bosTau2\|chr14 (19065012-19065780)
	1-768, gnl\|Hg17\|chr8 (67708611-67707890)
	1-768, gnl\|Mm7\|chr1 (9866569-9865891)