Non-Coding RNA Search

Ss1.1-rlin35_h6.5

Sequence:


               
               GCTCACTGGTTATCTTCTGACTGCAGCATCGCCCAGGAAAGGAAACTCACCCATTGTCTC
TCTGAGGATGAGTTAAGTTCTTCTACAAGTTCAACTGATAAATCAGATGGGGATTCCAGG
GAACATAAAGGTCATACAAATGAAATGAGTGACTTAGTACAACTGATGACTCAGACCCTA
AAGTTGGACTCTAAAGAGAGCTGTGAAGATCTCAGAGTACCAGATCCAGTGTCAGAATTT
AAACTTCATCGGAAGTACCGGGACACACTGATACTTCATGGGAAAGTTGCAGAAGAAGCA
GAGGAATTCCATTTTAAAGAGCTACCTTCAGGTGGTCAGTTTATTGTTTTACACCAAGCT
GGAAAGCATGTGTTTACTGGAGAAATGTATCAAACCAAGGAGATAATGCTTGCAAATTTG
TATTATTTTATTCGGATATCTCCATAAAAGGCATTTTTTGTAACAGTTATGTTCCTGAAA
AGTTGCATGAAAATTGATTTTAAAAATAAATGTAAATATGTGTTTGGAAAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTCACTGGTTATCTTCTGACTGCAGCATCGCCCAGGAAAGGAAACTCACCCATTGTCTC
TCTGAGGATGAGTTAAGTTCTTCTACAAGTTCAACTGATAAATCAGATGGGGATTCCAGG
GAACATAAAGGTCATACAAATGAAATGAGTGACTTAGTACAACTGATGACTCAGACCCTA
AAGTTGGACTCTAAAGAGAGCTGTGAAGATCTCAGAGTACCAGATCCAGTGTCAGAATTT
AAACTTCATCGGAAGTACCGGGACACACTGATACTTCATGGGAAAGTTGCAGAAGAAGCA
GAGGAATTCCATTTTAAAGAGCTACCTTCAGGTGGTCAGTTTATTGTTTTACACCAAGCT
GGAAAGCATGTGTTTACTGGAGAAATGTATCAAACCAAGGAGATAATGCTTGCAAATTTG
TATTATTTTATTCGGATATCTCCATAAAAGGCATTTTTTGTAACAGTTATGTTCCTGAAA
AGTTGCATGAAAATTGATTTTAAAAATAAATGTAAATATGTGTTTGGAAAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               126-518, gnl|bosTau2|chr22 (39694026-39693620)
               

               
               126-518, gnl|Hg17|chr3 (52748690-52747977)
               

               
               126-518, gnl|Mm7|chr14 (28411961-28412325)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               126-518, gnl|bosTau2|chr22 (39694026-39693620)
               

               
               126-518, gnl|Hg17|chr3 (52748690-52747977)
               

               
               126-518, gnl|Mm7|chr14 (28411961-28412325)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               rec (0.346141)
               

               
               fat (0.294855)
               

               
               lin (0.145603)
               

               
               lyg (0.133103)
               

               
               kid (0.129735)
               

               
               ldo (0.0970026)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.346141)
               

               
               fat (0.294855)
               

               
               lin (0.145603)
               

               
               lyg (0.133103)
               

               
               kid (0.129735)
               

               
               ldo (0.0970026)

	126-518, gnl\|bosTau2\|chr22 (39694026-39693620)
	126-518, gnl\|Hg17\|chr3 (52748690-52747977)
	126-518, gnl\|Mm7\|chr14 (28411961-28412325)

	rec (0.346141)
	fat (0.294855)
	lin (0.145603)
	lyg (0.133103)
	kid (0.129735)
	ldo (0.0970026)