Non-Coding RNA Search

Ss1.1-rlin37_n6.5

Sequence:


               
               AGAGCCAAAACTAATTCTCCCATAACAAATTCTACATGTTGTAACGTCCATCACTAAACA
AATTAAGATCCTCCAGAAAGAGGCATCTGGCTCTGGACTTAAGATGTCAGAATGTAAATG
AGGTCTCACTCTAGCCCTGGCAAGACCTCTCCATGTGCCTTGGTCCTCCCTGTATCAACT
GAGGTTAATTCTGCTATCTCACAGCACCTGGGTGTTATGAGTCCTGACAAATAAATGGTG
AAAAGCATCTTGCAAATGTTCTGTACTTTATAAATGTGTAGTGGATAATCTGGGGAGTCC
TCAGATAGAAATGTGTTCTTGTGTAGCTCAATTCAGACTACTAATTCGTCCATTGCTTTC
AAAAGGAATGTTTTACTAATCTGTTCTTTTTAATTATGAAAATTAGTTTCTAGTCATTTG
AACTATTTTTATTTTTCTGTGTGGGAAGAGATCAATAGTATACAGAAAATACCCAAGTCA
TATTTTAAGTGCTAAAACTGAAAGGGTTGTATAACAACATAGTGGGTTAAGAAGGAGAAT
TCTAGTGCAAATGTGGTGAGAAATATGAAGATTATCTTTGGTTTTGATATTGTATTATAA
ATAGTAGGTGTTGATGTGGTTGTTTTTAGATACTCTTTATTTTTAAGTTACCAGAAATTG
TCTTTTATTTTTGCAGTTTAGAACTATGTGGTTCTTGATATGTTTTGAATAAAGTTTTTA
TCGACTAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAGCCAAAACTAATTCTCCCATAACAAATTCTACATGTTGTAACGTCCATCACTAAACA
AATTAAGATCCTCCAGAAAGAGGCATCTGGCTCTGGACTTAAGATGTCAGAATGTAAATG
AGGTCTCACTCTAGCCCTGGCAAGACCTCTCCATGTGCCTTGGTCCTCCCTGTATCAACT
GAGGTTAATTCTGCTATCTCACAGCACCTGGGTGTTATGAGTCCTGACAAATAAATGGTG
AAAAGCATCTTGCAAATGTTCTGTACTTTATAAATGTGTAGTGGATAATCTGGGGAGTCC
TCAGATAGAAATGTGTTCTTGTGTAGCTCAATTCAGACTACTAATTCGTCCATTGCTTTC
AAAAGGAATGTTTTACTAATCTGTTCTTTTTAATTATGAAAATTAGTTTCTAGTCATTTG
AACTATTTTTATTTTTCTGTGTGGGAAGAGATCAATAGTATACAGAAAATACCCAAGTCA
TATTTTAAGTGCTAAAACTGAAAGGGTTGTATAACAACATAGTGGGTTAAGAAGGAGAAT
TCTAGTGCAAATGTGGTGAGAAATATGAAGATTATCTTTGGTTTTGATATTGTATTATAA
ATAGTAGGTGTTGATGTGGTTGTTTTTAGATACTCTTTATTTTTAAGTTACCAGAAATTG
TCTTTTATTTTTGCAGTTTAGAACTATGTGGTTCTTGATATGTTTTGAATAAAGTTTTTA
TCGACTAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-729, gnl|bosTau2|chr1 (32807387-32806655)
               

               
               1-729, gnl|Hg17|chr3 (112402245-112402982)
               

               
               1-729, gnl|Mm7|chr16 (46167324-46166626)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-729, gnl|bosTau2|chr1 (32807387-32806655)
               

               
               1-729, gnl|Hg17|chr3 (112402245-112402982)
               

               
               1-729, gnl|Mm7|chr16 (46167324-46166626)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               tes (0.207814)
               

               
               fcc (0.197785)
               

               
               rec (0.17307)
               

               
               fco (0.157208)
               

               
               lin (0.145603)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               fcc (0.197785)
               

               
               rec (0.17307)
               

               
               fco (0.157208)
               

               
               lin (0.145603)

	1-729, gnl\|bosTau2\|chr1 (32807387-32806655)
	1-729, gnl\|Hg17\|chr3 (112402245-112402982)
	1-729, gnl\|Mm7\|chr16 (46167324-46166626)

	tes (0.207814)
	fcc (0.197785)
	rec (0.17307)
	fco (0.157208)
	lin (0.145603)