Non-Coding RNA Search

Ss1.1-rlin40_f21.5

Sequence:


               
               GTTAGAAAGGGGAGTGTCAGAATCTGGCTCTCAGAGACCAGGTTTGCACATTTGCAACAA
ATTCCAGGATTTCCTAGATCAGAATGATTCCTAAGTGATTTTGAAATTGGGTTTTTATTT
AGGGTCAAAATTAGGACAAGAACGGGTATGCCTCTTTGGATACGTTTGTGTAGCCTAAAA
GAATGCAATTCAGCTTTGGGGCTCTCCGTAGCACGTGATTTACCCATAAAGGAGATGCAA
TGTCCTTCCTTAAATTAACACGTTTAAAATCTTTTAAGTGTGTAAATAGTACAGAAGCGT
TGGTCTTGTGTATCTCAAGTACAAGTAGACAGCTGCACTTTTTTTTTGCACATTGGATTA
AAGTAACTTCCATCAGCAACAAACATCAGTCTGTTTTTAACCAATATTAAAGATTGTCAG
ACCAAATGTTTATGTTCTTGAAGTATATTTCCTCACTGGTTACAGTTTTAAGTAGAAGTT
GACTGCCTTTTCATAGCCGTAAACAGAATTATAAGTGCTGTTCCAATTCTGGTGTAAGAA
ATTTCTTTTTGAACATTTTTTTAAGGAATATATTGAAATACCAACAATAGTTTGCATTTT
ATGTTCTGTAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTAGAAAGGGGAGTGTCAGAATCTGGCTCTCAGAGACCAGGTTTGCACATTTGCAACAA
ATTCCAGGATTTCCTAGATCAGAATGATTCCTAAGTGATTTTGAAATTGGGTTTTTATTT
AGGGTCAAAATTAGGACAAGAACGGGTATGCCTCTTTGGATACGTTTGTGTAGCCTAAAA
GAATGCAATTCAGCTTTGGGGCTCTCCGTAGCACGTGATTTACCCATAAAGGAGATGCAA
TGTCCTTCCTTAAATTAACACGTTTAAAATCTTTTAAGTGTGTAAATAGTACAGAAGCGT
TGGTCTTGTGTATCTCAAGTACAAGTAGACAGCTGCACTTTTTTTTTGCACATTGGATTA
AAGTAACTTCCATCAGCAACAAACATCAGTCTGTTTTTAACCAATATTAAAGATTGTCAG
ACCAAATGTTTATGTTCTTGAAGTATATTTCCTCACTGGTTACAGTTTTAAGTAGAAGTT
GACTGCCTTTTCATAGCCGTAAACAGAATTATAAGTGCTGTTCCAATTCTGGTGTAAGAA
ATTTCTTTTTGAACATTTTTTTAAGGAATATATTGAAATACCAACAATAGTTTGCATTTT
ATGTTCTGTAAT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-426, gnl|bosTau2|chr11 (38897537-38897958)
               

               
               1-426, gnl|Hg17|chr18 (5280071-5279673)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-426, gnl|bosTau2|chr11 (38897537-38897958)
               

               
               1-426, gnl|Hg17|chr18 (5280071-5279673)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               hea (0.204499)
               

               
               mga (0.160205)
               

               
               liv (0.146284)
               

               
               lin (0.145603)
               

               
               kid (0.129735)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               mga (0.160205)
               

               
               liv (0.146284)
               

               
               lin (0.145603)
               

               
               kid (0.129735)

	1-426, gnl\|bosTau2\|chr11 (38897537-38897958)
	1-426, gnl\|Hg17\|chr18 (5280071-5279673)

	hea (0.204499)
	mga (0.160205)
	liv (0.146284)
	lin (0.145603)
	kid (0.129735)