Ss1.1-rlin40_p9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGTTTATCATGAGTTGGTCATGACCACCAAGGAGTACATGCAGTGTGTGACTGCTGTGGA CGGAGAGTGGCTGGCAGAGCTGGGCCCCATGTTCTACAGCGTGAAGCAGGCAGGAAAGTC TCGGCAGGAGAACCGCCGACGGGCCAAAGAAGAAGCCTCTGCCATGGAGGAGGAGATGGC GCTGGCCGAGGAGCAGCTGCGGGCCCGGCGGCAGGAGCAGGAAAAGCGCAGCCCCCTGGG CAGTGTCAGGTCTACAAAGATCTACACTCCAGGTCGGAAAGAACAAGGGGAACCCATGAC CCCTCGCCGCACCCCAGCGCGCTTTGGGCTCTGAGCTGAGGCTGTGCCTGCAGAGGAGGG GAGCCAGGTGTTGAGTCCTGAGCCCTGTGGCCGGAGCCCCTGGGCCTGCTGACAAAACCC TTTCATCTGTGAACATCGCGGCCTCGGGGGCACCTGTTGAGGCCAGGCCCTGGCACGGAG GAAGTGGGAATTCCTCAGTGCAGGCGCGGGCCGCTGCCAGGACCATGAGAGGTGGCCGGA CCCACCATATCCAAATAAACTGTGTCTGGGACACTTGGTGTATAAATGACATGGCTGTGA CTGTGTTTTTTAAAATTCTTGTGTAAAGCAGCACAACAGACCTAGAGGGATTTGTAATTT GGTTATAATACAGGATTTGGAAATAAATTTATTGTTTATAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGTTTATCATGAGTTGGTCATGACCACCAAGGAGTACATGCAGTGTGTGACTGCTGTGGA CGGAGAGTGGCTGGCAGAGCTGGGCCCCATGTTCTACAGCGTGAAGCAGGCAGGAAAGTC TCGGCAGGAGAACCGCCGACGGGCCAAAGAAGAAGCCTCTGCCATGGAGGAGGAGATGGC GCTGGCCGAGGAGCAGCTGCGGGCCCGGCGGCAGGAGCAGGAAAAGCGCAGCCCCCTGGG CAGTGTCAGGTCTACAAAGATCTACACTCCAGGTCGGAAAGAACAAGGGGAACCCATGAC CCCTCGCCGCACCCCAGCGCGCTTTGGGCTCTGAGCTGAGGCTGTGCCTGCAGAGGAGGG GAGCCAGGTGTTGAGTCCTGAGCCCTGTGGCCGGAGCCCCTGGGCCTGCTGACAAAACCC TTTCATCTGTGAACATCGCGGCCTCGGGGGCACCTGTTGAGGCCAGGCCCTGGCACGGAG GAAGTGGGAATTCCTCAGTGCAGGCGCGGGCCGCTGCCAGGACCATGAGAGGTGGCCGGA CCCACCATATCCAAATAAACTGTGTCTGGGACACTTGGTGTATAAATGACATGGCTGTGA CTGTGTTTTTTAAAATTCTTGTGTAAAGCAGCACAACAGACCTAGAGGGATTTGTAATTT GGTTATAATACAGGATTTGGAAATAAATTTATTGTTTATAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 247-387, gnl|bosTau2|chr18 (32082071-32081931) | |
| 247-387, gnl|canFam2|chr5 (80836227-80836353) | |
| 247-387, gnl|echTel1|scaffold_321190 (91644-91518) | |
| 247-387, gnl|fr1|chrUn (219016460-219016341) | |
| 247-387, gnl|galGal2|chr11_random (882964-882844) | |
| 247-387, gnl|hg17|chr16 (70703793-70703919) | |
| 247-387, gnl|Hg17|chr16 (70703810-70703948) | |
| 247-387, gnl|loxAfr1|scaffold_699 (113358-113478) | |
| 247-387, gnl|mm7|chr8 (108148635-108148511) | |
| 247-387, gnl|Mm7|chr8 (108148618-108148479) | |
| 247-387, gnl|monDom2|scaffold_23 (1267478-1267595) | |
| 247-387, gnl|oryCun1|scaffold_177992 (22512-22388) | |
| 247-387, gnl|panTro1|chr18 (65072902-65073028) | |
| 247-387, gnl|rheMac2|chr20 (70526279-70526153) | |
| 247-387, gnl|rn3|chr19 (39421654-39421530) | |
| 247-387, gnl|tetNig1|chr5 (6006891-6006804) | |
| 420-703, gnl|bosTau2|chr18 (32081876-32081582) | |
| 420-703, gnl|canFam2|chr5 (80836354-80836746) | |
| 420-703, gnl|echTel1|scaffold_321190 (91517-91134) | |
| 420-703, gnl|hg17|chr16 (70703920-70704335) | |
| 420-703, gnl|Hg17|chr16 (70703995-70704307) | |
| 420-703, gnl|loxAfr1|scaffold_699 (113479-113894) | |
| 420-703, gnl|mm7|chr8 (108148510-108148115) | |
| 420-703, gnl|Mm7|chr8 (108148443-108148145) | |
| 420-703, gnl|monDom2|scaffold_23 (1267596-1268061) | |
| 420-703, gnl|oryCun1|scaffold_177992 (22387-21962) | |
| 420-703, gnl|panTro1|chr18 (65073029-65073444) | |
| 420-703, gnl|rheMac2|chr20 (70526152-70525742) | |
| 420-703, gnl|rn3|chr19 (39421529-39421139) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 247-387, gnl|bosTau2|chr18 (32082071-32081931) | |
| 247-387, gnl|canFam2|chr5 (80836227-80836353) | |
| 247-387, gnl|echTel1|scaffold_321190 (91644-91518) | |
| 247-387, gnl|fr1|chrUn (219016460-219016341) | |
| 247-387, gnl|galGal2|chr11_random (882964-882844) | |
| 247-387, gnl|hg17|chr16 (70703793-70703919) | |
| 247-387, gnl|Hg17|chr16 (70703810-70703948) | |
| 247-387, gnl|loxAfr1|scaffold_699 (113358-113478) | |
| 247-387, gnl|mm7|chr8 (108148635-108148511) | |
| 247-387, gnl|Mm7|chr8 (108148618-108148479) | |
| 247-387, gnl|monDom2|scaffold_23 (1267478-1267595) | |
| 247-387, gnl|oryCun1|scaffold_177992 (22512-22388) | |
| 247-387, gnl|panTro1|chr18 (65072902-65073028) | |
| 247-387, gnl|rheMac2|chr20 (70526279-70526153) | |
| 247-387, gnl|rn3|chr19 (39421654-39421530) | |
| 247-387, gnl|tetNig1|chr5 (6006891-6006804) | |
| 420-703, gnl|bosTau2|chr18 (32081876-32081582) | |
| 420-703, gnl|canFam2|chr5 (80836354-80836746) | |
| 420-703, gnl|echTel1|scaffold_321190 (91517-91134) | |
| 420-703, gnl|hg17|chr16 (70703920-70704335) | |
| 420-703, gnl|Hg17|chr16 (70703995-70704307) | |
| 420-703, gnl|loxAfr1|scaffold_699 (113479-113894) | |
| 420-703, gnl|mm7|chr8 (108148510-108148115) | |
| 420-703, gnl|Mm7|chr8 (108148443-108148145) | |
| 420-703, gnl|monDom2|scaffold_23 (1267596-1268061) | |
| 420-703, gnl|oryCun1|scaffold_177992 (22387-21962) | |
| 420-703, gnl|panTro1|chr18 (65073029-65073444) | |
| 420-703, gnl|rheMac2|chr20 (70526152-70525742) | |
| 420-703, gnl|rn3|chr19 (39421529-39421139) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| lin (0.291206) | |
| sto (0.179824) | |
| clu (0.119646) | |
| nbm (0.0993246) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lin (0.291206) | |
| sto (0.179824) | |
| clu (0.119646) | |
| nbm (0.0993246) |