Ss1.1-rlnt01c_b3.5
|
ACGAAGACAGACTTGTAGTTTATTTTGTATTTTTTTTAAATAAATACACTTTACATTAAA
GAAAAAGGCCTTTGATTTGTAATTTCCACATTGGGGAGAAAGGGAAGAAAAACAGATTTT
TGAAAAACTGAATCACAAAGAAAAATAGAGGGAGTGAACTTATATCCTAAGTTCCCTCAA
CTCCACAAAACCAATATCCACAATGACCTTGCTGCCCCCAAACCATGAAGGTGGGTGAAC
CTAGGCATTTACTCAGCAAACAAGCAGTGTCTTCCTCCCCCCACCTCTGGCATGAAGGAA
AACAAATTAACTTGACAGCATATGAGGCAACAAAATGGGTTAAAAAATCATATATTATAT
TTATAATAAAATATTCTTAATCCTTATCAATTTAAGAAACCACGATTTTCCTTTTCATTT
AAATACGTATGTAAAAATGCCTCTATATTGTTCTTTAGACATCATTTTCTTCCATAGAAA
ATGAAGTGCCGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCC
TTTTTTTTTTCTTTTTAAGTTTTATAAAAAACTATTTCTTGTTCTTTAAGTAAAGAACAT
TATACAAAGAAAATATATTGTGAAATAACCCCAGAGACATGTTTTGTTTTGTTTTTTTCC
CTTGAGGAAAGATATGTCCATCCTAGGAGAAAGGGGAAGCAGAATAGGGCCTAACCCCTG
TTGTCTTTTTTTTTGTGGTTGTTATTGTTTTTAGAAGGACCTTCAGATTCCAGTGAGACT
CTCTAAGCCATAATCCTCTGAAAGCAGGGCATGCAGTTCCTTATAAGAGCCCTGGGAGAA
AGGGAAGGGAAGATGTTCTGAATTCATTTGACTTATTTTCTCGCCTGCTAAGAATCTCTT
CCATGTGGCTCCTCACTCGTTTAGAGATAAGATGATGTCATCTTCCAGATCAGAGTTGTC
AGAGGTGTCAGTGTCCCCCAGGATCAGTTCCACTTCCTCATCTGCATCGGAGTCTTCATC
CTCCCCGTCCTCTCCCTCCTCTAGCAGGTTTGCTAGCTCCTCATCAGAGGGAGAAAAGTC
ATTGTCCCCATCCTCCCCTGCGTTTTCGTTGTTGTCATCCTCCTCCAACTCCGCCTCCAG
CAACTGGTCAGTGTCAAGCTCATCTAGGTCATCAGTGTCGTCGTCATCTTCATCATCATC
TTCTTCTTCCTGTTCTTCCTCTTCCTGGTCTTCCTCTTCATCCTCATCCTCTGCCAGACG
CTGCCTGCCCAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACGAAGACAGACTTGTAGTTTATTTTGTATTTTTTTTAAATAAATACACTTTACATTAAA
GAAAAAGGCCTTTGATTTGTAATTTCCACATTGGGGAGAAAGGGAAGAAAAACAGATTTT
TGAAAAACTGAATCACAAAGAAAAATAGAGGGAGTGAACTTATATCCTAAGTTCCCTCAA
CTCCACAAAACCAATATCCACAATGACCTTGCTGCCCCCAAACCATGAAGGTGGGTGAAC
CTAGGCATTTACTCAGCAAACAAGCAGTGTCTTCCTCCCCCCACCTCTGGCATGAAGGAA
AACAAATTAACTTGACAGCATATGAGGCAACAAAATGGGTTAAAAAATCATATATTATAT
TTATAATAAAATATTCTTAATCCTTATCAATTTAAGAAACCACGATTTTCCTTTTCATTT
AAATACGTATGTAAAAATGCCTCTATATTGTTCTTTAGACATCATTTTCTTCCATAGAAA
ATGAAGTGCCGGGACAAGAGACCTGGTGGATATAAGTTCATACCCTCAGTTATAAATGCC
TTTTTTTTTTCTTTTTAAGTTTTATAAAAAACTATTTCTTGTTCTTTAAGTAAAGAACAT
TATACAAAGAAAATATATTGTGAAATAACCCCAGAGACATGTTTTGTTTTGTTTTTTTCC
CTTGAGGAAAGATATGTCCATCCTAGGAGAAAGGGGAAGCAGAATAGGGCCTAACCCCTG
TTGTCTTTTTTTTTGTGGTTGTTATTGTTTTTAGAAGGACCTTCAGATTCCAGTGAGACT
CTCTAAGCCATAATCCTCTGAAAGCAGGGCATGCAGTTCCTTATAAGAGCCCTGGGAGAA
AGGGAAGGGAAGATGTTCTGAATTCATTTGACTTATTTTCTCGCCTGCTAAGAATCTCTT
CCATGTGGCTCCTCACTCGTTTAGAGATAAGATGATGTCATCTTCCAGATCAGAGTTGTC
AGAGGTGTCAGTGTCCCCCAGGATCAGTTCCACTTCCTCATCTGCATCGGAGTCTTCATC
CTCCCCGTCCTCTCCCTCCTCTAGCAGGTTTGCTAGCTCCTCATCAGAGGGAGAAAAGTC
ATTGTCCCCATCCTCCCCTGCGTTTTCGTTGTTGTCATCCTCCTCCAACTCCGCCTCCAG
CAACTGGTCAGTGTCAAGCTCATCTAGGTCATCAGTGTCGTCGTCATCTTCATCATCATC
TTCTTCTTCCTGTTCTTCCTCTTCCTGGTCTTCCTCTTCATCCTCATCCTCTGCCAGACG
CTGCCTGCCCAC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
5' of BC022792, - |
|
5' of BC022792, - |
Human gene identifier and UTR site,
human gene reading direction
|
5' of BC022792, - |
|
5' of BC022792, - |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
tes (0.415628) |
|
sto (0.359648) |
|
spl (0.286369) |
|
sug (0.254582) |
|
med (0.232504) |
|
spc (0.226732) |
|
cmu (0.186393) |
|
eli (0.151814) |
|
bfe (0.149858) |
|
lnt (0.142308) |
|
csk (0.140746) |
|
kid (0.129735) |
|
bla (0.124347) |
|
cty (0.10408) |
|
tes (0.415628) |
|
sto (0.359648) |
|
spl (0.286369) |
|
sug (0.254582) |
|
med (0.232504) |
|
spc (0.226732) |
|
cmu (0.186393) |
|
eli (0.151814) |
|
bfe (0.149858) |
|
lnt (0.142308) |
|
csk (0.140746) |
|
kid (0.129735) |
|
bla (0.124347) |
|
cty (0.10408) |