Non-Coding RNA Search

Ss1.1-rlnt01c_i5.5

Sequence:


               
               ACTACAGCACCCTGTGCAAGCCAGCACCACTCACAGGGACCCTGGAGGTGCGTGTGGTGG
GGTGCAGAGACCTTCCAGAGACCATCCCTTGGAATCCCTCACCTTCGGTGGGGGGGCCTG
GGACCCCCGAAAGCCGTACCCCCTTCCTGAGCCGTCCAGCCCGGGGCCTTTACAGCCGAA
GTGGAAGCCTCAGTGGCCGGAGCAGCCTCAAAGCAGAAGCCGAGAACACCAGTGAGGTGA
GCACTGTGCTCAAGCTGGATAACACGGTTGTGGGACAGACGTCCTGGAAGCCATGTGGCC
CCAACGCCTGGGACCAGAGCTTCACCCTGGAGCTGGAGAGGGCACGGGAACTGGAGTTGG
CAGTGTTCTGGCGGGACCAACGGGGCCTGTGTGCCCTCAAATTCCTGAAGTTGGAGGATT
TCTTGGACAATGAGAGGCATGAGGTGCAGCTGGACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTACAGCACCCTGTGCAAGCCAGCACCACTCACAGGGACCCTGGAGGTGCGTGTGGTGG
GGTGCAGAGACCTTCCAGAGACCATCCCTTGGAATCCCTCACCTTCGGTGGGGGGGCCTG
GGACCCCCGAAAGCCGTACCCCCTTCCTGAGCCGTCCAGCCCGGGGCCTTTACAGCCGAA
GTGGAAGCCTCAGTGGCCGGAGCAGCCTCAAAGCAGAAGCCGAGAACACCAGTGAGGTGA
GCACTGTGCTCAAGCTGGATAACACGGTTGTGGGACAGACGTCCTGGAAGCCATGTGGCC
CCAACGCCTGGGACCAGAGCTTCACCCTGGAGCTGGAGAGGGCACGGGAACTGGAGTTGG
CAGTGTTCTGGCGGGACCAACGGGGCCTGTGTGCCCTCAAATTCCTGAAGTTGGAGGATT
TCTTGGACAATGAGAGGCATGAGGTGCAGCTGGACA

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               19-245, gnl|bosTau2|chr7 (7412198-7411974)
               

               
               19-245, gnl|Hg17|chr19 (14423623-14423848)
               

               
               19-245, gnl|Mm7|chr8 (82262038-82261817)
               


               
               341-456, gnl|bosTau2|chr7 (7409470-7409355)
               

               
               341-456, gnl|Hg17|chr19 (14430043-14430158)
               

               
               341-456, gnl|Mm7|chr8 (82259525-82259410)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-245, gnl|bosTau2|chr7 (7412198-7411974)
               

               
               19-245, gnl|Hg17|chr19 (14423623-14423848)
               

               
               19-245, gnl|Mm7|chr8 (82262038-82261817)
               


               
               341-456, gnl|bosTau2|chr7 (7409470-7409355)
               

               
               341-456, gnl|Hg17|chr19 (14430043-14430158)
               

               
               341-456, gnl|Mm7|chr8 (82259525-82259410)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               clu (0.957167)
               

               
               lnt (0.142308)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.957167)
               

               
               lnt (0.142308)
               

               
               cty (0.10408)

	19-245, gnl\|bosTau2\|chr7 (7412198-7411974)
	19-245, gnl\|Hg17\|chr19 (14423623-14423848)
	19-245, gnl\|Mm7\|chr8 (82262038-82261817)

	341-456, gnl\|bosTau2\|chr7 (7409470-7409355)
	341-456, gnl\|Hg17\|chr19 (14430043-14430158)
	341-456, gnl\|Mm7\|chr8 (82259525-82259410)