Non-Coding RNA Search

Ss1.1-rlnt06c_o23.5

Sequence:


               
               AAGACTGGATGTGTATATTTATTATGGTATCTAAAAATCATGAAGTTCATCACTTTCCAG
GAGCATAGATAAAAGCAAATTGGTAGTGCATCAGAGTTACTTTTCAGTGCACCATGTCAT
CACTAAAATGAGTGCTATAATGTTACAGGGCTTTCAGGTTTGTAAAAACATAACCATAAA
TTATATTGACGTCAGATATGAGTTGAGTATCTATAAACTATCACGTGTATCTCAAATATT
GGACTGCTGTTTGATGACTGGATATTGCTGCATAATTTTCTTCTATTGTCCCATATCCTT
TTGGAGAGAGAGATTTAATGGGATTTGAAATGTGCAAGCTGTCTAAATAAGATGCAGTCA
AATAAAGTATGGTTAAGTTGTGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGACTGGATGTGTATATTTATTATGGTATCTAAAAATCATGAAGTTCATCACTTTCCAG
GAGCATAGATAAAAGCAAATTGGTAGTGCATCAGAGTTACTTTTCAGTGCACCATGTCAT
CACTAAAATGAGTGCTATAATGTTACAGGGCTTTCAGGTTTGTAAAAACATAACCATAAA
TTATATTGACGTCAGATATGAGTTGAGTATCTATAAACTATCACGTGTATCTCAAATATT
GGACTGCTGTTTGATGACTGGATATTGCTGCATAATTTTCTTCTATTGTCCCATATCCTT
TTGGAGAGAGAGATTTAATGGGATTTGAAATGTGCAAGCTGTCTAAATAAGATGCAGTCA
AATAAAGTATGGTTAAGTTGTGTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-384, gnl|bosTau2|chr10 (46340560-46340178)
               

               
               1-384, gnl|Hg17|chr14 (56948842-56949221)
               

               
               1-384, gnl|Mm7|chr14 (44522903-44523286)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-384, gnl|bosTau2|chr10 (46340560-46340178)
               

               
               1-384, gnl|Hg17|chr14 (56948842-56949221)
               

               
               1-384, gnl|Mm7|chr14 (44522903-44523286)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fce (0.271592)
               

               
               lnt (0.142308)
               

               
               ova (0.129132)
               

               
               ebs (0.118301)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               lnt (0.142308)
               

               
               ova (0.129132)
               

               
               ebs (0.118301)

	1-384, gnl\|bosTau2\|chr10 (46340560-46340178)
	1-384, gnl\|Hg17\|chr14 (56948842-56949221)
	1-384, gnl\|Mm7\|chr14 (44522903-44523286)