Non-Coding RNA Search

Ss1.1-rlnt08c_m24.5

Sequence:


               
               CCGCTGGACCTGAATCCCCGGACGGAGGAAAGCCAGGACCCCGTGCCTTTCCTGAAGCTG
GTTCGGCCTCGCAGAAGTGCACCTAAAGGCCGGAAGCCACGGGCTCGCAGAGTGATCGCT
GCCCACTATGAAGTTCACCCACGACCGGGACAGGATGGAGCGCAGGCGGGTGTAGACGGG
ACGGTGAGTGGCTGGGAGGAGGCCAAAATCAACAGCTCCAACCCACTGCGCTATGACCGC
CAGAGCGGGCAATTTTTGGTCACCCGGGCAGGGCTGTACTACCTGTACTGTCAGGTGCAC
TTTGATGAGGGGAAGGCCGTCTACCTGAAGCTGGACTTGCTGGTGGACGACACGCTGGCC
CTGCGCTGCCTGGAGGAGTTCTCGGCCACGGCGGCGAGTTCCCTCGGGCCCCAGCTCCGT
CTCTGCCAGGTGTCTGGGCTATTGCCCCTGCGGCCGGGGTCCTCCCTGCGGATCCGCACC
CTCCCCTGGGCCCACCTCAAGGCTGCCCCCTTCCTCACCTACTTTGGACTCTTCCAAGTT
CACTGAGGGGCCCCGGGCTCCCCAGCAGCCGCCCCACCCCGGGCTGCTCCTCCCCAGACC
TGCCTCTCCCTCCGTGTAGGCTTCCCCGGGCTGGGCTCGCTCACGTGATGTCACCCAGAG
AGTCCCATCGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGCTGGACCTGAATCCCCGGACGGAGGAAAGCCAGGACCCCGTGCCTTTCCTGAAGCTG
GTTCGGCCTCGCAGAAGTGCACCTAAAGGCCGGAAGCCACGGGCTCGCAGAGTGATCGCT
GCCCACTATGAAGTTCACCCACGACCGGGACAGGATGGAGCGCAGGCGGGTGTAGACGGG
ACGGTGAGTGGCTGGGAGGAGGCCAAAATCAACAGCTCCAACCCACTGCGCTATGACCGC
CAGAGCGGGCAATTTTTGGTCACCCGGGCAGGGCTGTACTACCTGTACTGTCAGGTGCAC
TTTGATGAGGGGAAGGCCGTCTACCTGAAGCTGGACTTGCTGGTGGACGACACGCTGGCC
CTGCGCTGCCTGGAGGAGTTCTCGGCCACGGCGGCGAGTTCCCTCGGGCCCCAGCTCCGT
CTCTGCCAGGTGTCTGGGCTATTGCCCCTGCGGCCGGGGTCCTCCCTGCGGATCCGCACC
CTCCCCTGGGCCCACCTCAAGGCTGCCCCCTTCCTCACCTACTTTGGACTCTTCCAAGTT
CACTGAGGGGCCCCGGGCTCCCCAGCAGCCGCCCCACCCCGGGCTGCTCCTCCCCAGACC
TGCCTCTCCCTCCGTGTAGGCTTCCCCGGGCTGGGCTCGCTCACGTGATGTCACCCAGAG
AGTCCCATCGGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|37182858|gb|AAQ89229.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|37182858|gb|AAQ89229.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               292-452, gnl|bosTau2|chr15 (25625950-25625790)
               

               
               292-452, gnl|Hg17|chr17 (7401137-7401290)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               292-452, gnl|bosTau2|chr15 (25625950-25625790)
               

               
               292-452, gnl|Hg17|chr17 (7401137-7401290)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               lnt (0.142308)
               

               
               nca (0.136874)
               

               
               eep (0.122564)
               

               
               med (0.116252)
               

               
               jca (0.11396)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)
               

               
               nca (0.136874)
               

               
               eep (0.122564)
               

               
               med (0.116252)
               

               
               jca (0.11396)

	292-452, gnl\|bosTau2\|chr15 (25625950-25625790)
	292-452, gnl\|Hg17\|chr17 (7401137-7401290)

	lnt (0.142308)
	nca (0.136874)
	eep (0.122564)
	med (0.116252)
	jca (0.11396)